Analysis of interatomic Contacts of Structural Units in PDB entry:
1MIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MIO entry

There are 4 chains in PDB entry 1MIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 526
B
 LEU 2ARG 458
C
 SER 2SER 526
D
 LEU 2ARG 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 1MIO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 12Right-handed alpha
Helix 2
2
A
14 22Right-handed alpha
Helix 3
3
A
53 59Right-handed alpha
Helix 4
4
A
77 82Right-handed alpha
Helix 5
5
A
111 118Right-handed alpha
Helix 6
6
A
119 134Right-handed alpha
Helix 7
7
A
144 151Right-handed alpha
Helix 8
8
A
153 166Right-handed alpha
Helix 9
9
A
182 197Right-handed alpha
Helix 10
10
A
220 233Right-handed alpha
Helix 11
11
A
245 251Right-handed alpha
Helix 12
12
A
262 278Right-handed alpha
Helix 13
13
A
288 303Right-handed alpha
Helix 14
14
A
305 335Right-handed alpha
Helix 15
15
A
346 359Right-handed alpha
Helix 16
16
A
371 377Right-handed alpha
Helix 17
17
A
378 381Right-handed 310
Helix 18
18
A
411 419Right-handed alpha
Helix 19
19
A
420 422Right-handed 310
Helix 20
20
A
429 433Right-handed 310
Helix 21
21
A
445 457Right-handed alpha
Helix 22
22
A
464 474Right-handed alpha
Helix 23
23
A
493 508Right-handed alpha
Helix 24
24
A
509 515Right-handed 310
Helix 25
25
B
24 33Right-handed alpha
Helix 26
26
B
45 61Right-handed alpha
Helix 27
27
B
74 79Right-handed alpha
Helix 28
28
B
80 95Right-handed alpha
Helix 29
29
B
105 112Right-handed alpha
Helix 30
30
B
114 125Right-handed alpha
Helix 31
31
B
145 162Right-handed alpha
Helix 32
32
B
180 195Right-handed alpha
Helix 33
33
B
225 231Right-handed alpha
Helix 34
34
B
242 257Right-handed alpha
Helix 35
35
B
268 285Right-handed alpha
Helix 36
36
B
289 306Right-handed alpha
Helix 37
37
B
306 311Right-handed alpha
Helix 38
38
B
320 333Right-handed alpha
Helix 39
39
B
347 360Right-handed alpha
Helix 40
40
B
373 384Right-handed alpha
Helix 41
41
B
392 394Right-handed 310
Helix 42
42
B
395 403Right-handed alpha
Helix 43
43
B
418 422Right-handed 310
Helix 44
44
B
427 449Right-handed alpha
Helix 45
45
C
3 11Right-handed alpha
Helix 46
46
C
14 23Right-handed alpha
Helix 47
47
C
53 59Right-handed alpha
Helix 48
48
C
77 82Right-handed alpha
Helix 49
49
C
93 97Right-handed 310
Helix 50
50
C
111 117Right-handed alpha
Helix 51
51
C
120 134Right-handed alpha
Helix 52
52
C
144 150Right-handed alpha
Helix 53
53
C
153 166Right-handed alpha
Helix 54
54
C
182 197Right-handed alpha
Helix 55
55
C
220 231Right-handed alpha
Helix 56
56
C
245 251Right-handed alpha
Helix 57
57
C
262 267Right-handed alpha
Helix 58
58
C
266 278Right-handed alpha
Helix 59
59
C
288 303Right-handed alpha
Helix 60
60
C
305 335Right-handed alpha
Helix 61
61
C
346 358Right-handed alpha
Helix 62
62
C
371 376Right-handed alpha
Helix 63
63
C
377 381Right-handed 310
Helix 64
64
C
412 419Right-handed alpha
Helix 65
65
C
420 422Right-handed 310
Helix 66
66
C
445 457Right-handed alpha
Helix 67
67
C
464 474Right-handed alpha
Helix 68
68
C
491 508Right-handed alpha
Helix 69
69
C
509 515Right-handed 310
Helix 70
70
D
24 33Right-handed alpha
Helix 71
71
D
46 61Right-handed alpha
Helix 72
72
D
74 79Right-handed alpha
Helix 73
73
D
80 95Right-handed alpha
Helix 74
74
D
105 112Right-handed alpha
Helix 75
75
D
114 125Right-handed alpha
Helix 76
76
D
145 162Right-handed alpha
Helix 77
77
D
180 194Right-handed alpha
Helix 78
78
D
225 232Right-handed alpha
Helix 79
79
D
233 235Right-handed 310
Helix 80
80
D
246 257Right-handed alpha
Helix 81
81
D
268 285Right-handed alpha
Helix 82
82
D
289 306Right-handed alpha
Helix 83
83
D
307 311Right-handed 310
Helix 84
84
D
320 335Right-handed alpha
Helix 85
85
D
347 362Right-handed alpha
Helix 86
86
D
373 384Right-handed alpha
Helix 87
87
D
392 394Right-handed 310
Helix 88
88
D
395 402Right-handed alpha
Helix 89
89
D
418 422Right-handed 310
Helix 90
90
D
425 449Right-handed alpha
Helix 91
91
D
450 454Right-handed 310
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There are 13 sheets in PDB entry 1MIO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
438 442anti-parallel
Strand 3
A
361 367parallel
Strand 4
A
338 343parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
138 141parallel
Strand 3
A
69 76parallel
Strand 4
A
106 110parallel
Strand 5
B
15 17anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 241first strand
Strand 2
A
209 215parallel
Strand 3
A
257 260parallel
Strand 4
A
281 283parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 463first strand
Strand 2
A
477 480parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 68first strand
Strand 2
B
38 43parallel
Strand 3
B
99 104parallel
Strand 4
B
133 137parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 200first strand
Strand 2
B
172 175parallel
Strand 3
B
237 241parallel
Strand 4
B
261 264parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 370first strand
Strand 2
B
337 343parallel
Strand 3
B
314 319parallel
Strand 4
B
388 391parallel
Strand 5
B
406 408parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 28first strand
Strand 2
C
438 441anti-parallel
Strand 3
C
361 367parallel
Strand 4
C
338 343parallel
Strand 5
C
460 462parallel
Strand 6
C
477 478parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 172first strand
Strand 2
C
138 143parallel
Strand 3
C
69 74parallel
Strand 4
C
106 107parallel
Strand 5
D
16 17anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 240first strand
Strand 2
C
209 213parallel
Strand 3
C
257 260parallel
Strand 4
C
281 283parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 68first strand
Strand 2
D
38 43parallel
Strand 3
D
99 104parallel
Strand 4
D
133 136parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 200first strand
Strand 2
D
172 175parallel
Strand 3
D
237 241parallel
Strand 4
D
261 264parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
367 370first strand
Strand 2
D
337 343parallel
Strand 3
D
314 319parallel
Strand 4
D
388 391parallel
Strand 5
D
406 408parallel
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