Analysis of interatomic Contacts of Structural Units in PDB entry:
1MIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MIU entry

There are 2 chains in PDB entry 1MIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 7HIS 63
A
 LYS 2399GLU 3103
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1MIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
9 11Right-handed 310
Helix 2
2
B
58 63Right-handed alpha
Helix 3
3
A
2403 2421Right-handed alpha
Helix 4
4
A
2429 2436Right-handed alpha
Helix 5
5
A
2445 2449Right-handed 310
Helix 6
6
A
2485 2490Right-handed alpha
Helix 7
7
A
2517 2528Right-handed alpha
Helix 8
8
A
2537 2555Right-handed alpha
Helix 9
9
A
2569 2585Right-handed alpha
Helix 10
10
A
2591 2598Right-handed alpha
Helix 11
11
A
2654 2663Right-handed alpha
Helix 12
12
A
2700 2704Right-handed 310
Helix 13
13
A
2725 2729Right-handed 310
Helix 14
14
A
2766 2779Right-handed alpha
Helix 15
15
A
2781 2792Right-handed alpha
Helix 16
16
A
2812 2818Right-handed alpha
Helix 17
17
A
2821 2831Right-handed alpha
Helix 18
18
A
2854 2859Right-handed alpha
Helix 19
19
A
2860 2872Right-handed alpha
Helix 20
20
A
2872 2877Right-handed alpha
Helix 21
21
A
2912 2919Right-handed alpha
Helix 22
22
A
2960 2965Right-handed alpha
Helix 23
23
A
2976 2981Right-handed 310
Helix 24
24
A
3073 3081Right-handed alpha
Helix 25
25
A
3081 3086Right-handed alpha
Helix 26
26
A
3089 3103Right-handed alpha
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There are 8 sheets in PDB entry 1MIU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
A
2442 2443parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2500 2501first strand
Strand 2
A
2507 2508anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2607 2608first strand
Strand 2
A
2714 2715anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2610 2611first strand
Strand 2
A
2642 2643anti-parallel
Strand 3
A
2648 2649anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2679 2680first strand
Strand 2
A
2696 2697anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2736 2746first strand
Strand 2
A
2889 2896anti-parallel
Strand 3
A
2904 2909anti-parallel
Strand 4
A
2945 2957parallel
Strand 5
A
2924 2930anti-parallel
Strand 6
A
2736 2746anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2753 2754first strand
Strand 2
A
2760 2761anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3056 3058first strand
Strand 2
A
3019 3024parallel
Strand 3
A
3009 3013anti-parallel
Strand 4
A
2990 3001anti-parallel
Strand 5
A
3037 3044anti-parallel
Strand 6
A
3063 3065anti-parallel
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