Analysis of interatomic Contacts of Structural Units in PDB entry:
1MIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MIX entry

There is 1 chain in PDB entry 1MIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 195LEU 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1MIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
200 206Right-handed alpha
Helix 2
2
A
208 225Right-handed alpha
Helix 3
3
A
231 248Right-handed alpha
Helix 4
4
A
261 265Right-handed 310
Helix 5
5
A
267 271Right-handed 310
Helix 6
6
A
275 286Right-handed alpha
Helix 7
7
A
290 305Right-handed alpha
Helix 8
8
A
354 356Right-handed 310
Helix 9
9
A
370 374Right-handed 310
Helix 10
10
A
384 394Right-handed alpha
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There are 2 sheets in PDB entry 1MIX. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 317first strand
Strand 2
A
326 332anti-parallel
Strand 3
A
336 341anti-parallel
Strand 4
A
347 352anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 361first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
378 381anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il