Analysis of interatomic Contacts of Structural Units in PDB entry:
1MJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MJQ entry

There are 12 chains in PDB entry 1MJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 T -1 A 17
F
 T -1 A 17
K
 T -1 A 17
L
 T -1 A 17
A
 ALA 1TYR 104
B
 ALA 1TYR 104
C
 ALA 1TYR 104
D
 ALA 1TYR 104
G
 ALA 1TYR 104
H
 ALA 1TYR 104
I
 ALA 1TYR 104
J
 ALA 1TYR 104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1MJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA
A
30 45Right-handed alpha
Helix 2
AB
A
53 66Right-handed alpha
Helix 3
AC
A
86 94Right-handed alpha
Helix 4
BA
B
30 45Right-handed alpha
Helix 5
BB
B
53 66Right-handed alpha
Helix 6
BC
B
86 95Right-handed alpha
Helix 7
CA
C
30 45Right-handed alpha
Helix 8
CB
C
53 66Right-handed alpha
Helix 9
CC
C
86 94Right-handed alpha
Helix 10
A
D
30 45Right-handed alpha
Helix 11
DB
D
53 66Right-handed alpha
Helix 12
C
D
86 95Right-handed alpha
Helix 13
GA
G
30 45Right-handed alpha
Helix 14
GB
G
53 66Right-handed alpha
Helix 15
GC
G
86 94Right-handed alpha
Helix 16
HA
H
30 45Right-handed alpha
Helix 17
HB
H
53 66Right-handed alpha
Helix 18
HC
H
86 95Right-handed alpha
Helix 19
IA
I
30 45Right-handed alpha
Helix 20
IB
I
53 66Right-handed alpha
Helix 21
IC
I
86 94Right-handed alpha
Helix 22
JA
J
30 45Right-handed alpha
Helix 23
JB
J
53 66Right-handed alpha
Helix 24
JC
J
86 95Right-handed alpha
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There are 8 sheets in PDB entry 1MJQ. Click on sheet of interest to get list of strands forming it: SA, SB, SC, SD, SG, SH, SI, SJ,

There are 1 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 28first strand
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There are 1 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 28first strand
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There are 1 strands in SC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 28first strand
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There are 1 strands in SD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
21 28first strand
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There are 1 strands in SG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
21 28first strand
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There are 1 strands in SH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
21 28first strand
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There are 1 strands in SI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
21 28first strand
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There are 1 strands in SJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
21 28first strand
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