Analysis of interatomic Contacts of Structural Units in PDB entry:
1ML6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ML6 entry

There are 4 chains in PDB entry 1ML6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2LEU 110
A
 PRO 112PHE 221
B
 GLY 302LEU 410
B
 PRO 412PHE 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 1ML6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
15 26Right-handed alpha
Helix 3
3
A
36 46Right-handed alpha
Helix 4
4
A
66 78Right-handed alpha
Helix 5
5
A
84 108Right-handed alpha
Helix 6
6
A
109 111Right-handed 310
Helix 7
7
A
115 130Right-handed alpha
Helix 8
8
A
130 143Right-handed alpha
Helix 9
9
A
153 171Right-handed alpha
Helix 10
10
A
172 175Right-handed 310
Helix 11
11
A
177 190Right-handed alpha
Helix 12
12
A
190 198Right-handed alpha
Helix 13
13
A
208 219Right-handed alpha
Helix 14
14
B
315 325Right-handed alpha
Helix 15
15
B
336 346Right-handed alpha
Helix 16
16
B
366 378Right-handed alpha
Helix 17
17
B
384 408Right-handed alpha
Helix 18
18
B
409 411Right-handed 310
Helix 19
19
B
415 430Right-handed alpha
Helix 20
20
B
430 443Right-handed alpha
Helix 21
21
B
453 470Right-handed alpha
Helix 22
22
B
471 475Right-handed 310
Helix 23
23
B
477 490Right-handed alpha
Helix 24
24
B
490 498Right-handed alpha
Helix 25
25
B
508 519Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1ML6. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
5 9parallel
Strand 3
A
56 59anti-parallel
Strand 4
A
62 65anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 333first strand
Strand 2
B
305 308parallel
Strand 3
B
356 359anti-parallel
Strand 4
B
362 365anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il