Analysis of interatomic Contacts of Structural Units in PDB entry:
1MLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MLV entry

There are 3 chains in PDB entry 1MLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 50TYR 486
B
 SER 49GLN 488
C
 LEU 50PHE 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 1MLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 63Right-handed alpha
Helix 2
2
A
102 104Right-handed 310
Helix 3
3
A
106 112Right-handed alpha
Helix 4
4
A
123 138Right-handed alpha
Helix 5
5
A
143 148Right-handed alpha
Helix 6
6
A
161 166Right-handed alpha
Helix 7
7
A
167 169Right-handed 310
Helix 8
8
A
171 195Right-handed alpha
Helix 9
9
A
208 221Right-handed alpha
Helix 10
10
A
292 300Right-handed alpha
Helix 11
11
A
306 309Right-handed 310
Helix 12
12
A
324 334Right-handed alpha
Helix 13
13
A
354 363Right-handed alpha
Helix 14
14
A
365 377Right-handed 310
Helix 15
15
A
379 387Right-handed alpha
Helix 16
16
A
389 409Right-handed alpha
Helix 17
17
A
414 423Right-handed alpha
Helix 18
18
A
427 457Right-handed alpha
Helix 19
19
A
463 469Right-handed alpha
Helix 20
20
A
470 472Right-handed 310
Helix 21
21
A
479 484Right-handed alpha
Helix 22
22
B
49 64Right-handed alpha
Helix 23
23
B
102 104Right-handed 310
Helix 24
24
B
106 112Right-handed alpha
Helix 25
25
B
115 120Right-handed alpha
Helix 26
26
B
123 138Right-handed alpha
Helix 27
27
B
143 150Right-handed alpha
Helix 28
28
B
161 166Right-handed alpha
Helix 29
29
B
167 169Right-handed 310
Helix 30
30
B
171 195Right-handed alpha
Helix 31
31
B
196 200Right-handed 310
Helix 32
32
B
208 223Right-handed alpha
Helix 33
33
B
237 241Right-handed 310
Helix 34
34
B
257 261Right-handed 310
Helix 35
35
B
263 266Right-handed 310
Helix 36
36
B
292 300Right-handed alpha
Helix 37
37
B
306 309Right-handed 310
Helix 38
38
B
324 335Right-handed alpha
Helix 39
39
B
354 364Right-handed alpha
Helix 40
40
B
366 373Right-handed 310
Helix 41
41
B
379 387Right-handed alpha
Helix 42
42
B
389 410Right-handed alpha
Helix 43
43
B
414 423Right-handed alpha
Helix 44
44
B
427 457Right-handed alpha
Helix 45
45
B
463 469Right-handed alpha
Helix 46
46
B
478 487Right-handed alpha
Helix 47
47
C
51 64Right-handed alpha
Helix 48
48
C
102 104Right-handed 310
Helix 49
49
C
106 112Right-handed alpha
Helix 50
50
C
123 138Right-handed alpha
Helix 51
51
C
143 148Right-handed alpha
Helix 52
52
C
156 160Right-handed 310
Helix 53
53
C
161 167Right-handed alpha
Helix 54
54
C
171 195Right-handed alpha
Helix 55
55
C
196 200Right-handed 310
Helix 56
56
C
208 223Right-handed alpha
Helix 57
57
C
237 241Right-handed 310
Helix 58
58
C
263 266Right-handed 310
Helix 59
59
C
292 300Right-handed alpha
Helix 60
60
C
306 309Right-handed 310
Helix 61
61
C
324 334Right-handed alpha
Helix 62
62
C
354 364Right-handed alpha
Helix 63
63
C
368 373Right-handed 310
Helix 64
64
C
379 387Right-handed alpha
Helix 65
65
C
389 410Right-handed alpha
Helix 66
66
C
414 423Right-handed alpha
Helix 67
67
C
427 457Right-handed alpha
Helix 68
68
C
458 460Right-handed 310
Helix 69
69
C
463 469Right-handed alpha
Helix 70
70
C
478 484Right-handed alpha
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There are 12 sheets in PDB entry 1MLV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
81 85anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 100first strand
Strand 2
A
268 273anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
A
284 285parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 317first strand
Strand 2
A
340 346anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 78first strand
Strand 2
B
81 86anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 100first strand
Strand 2
B
268 272anti-parallel
Strand 3
B
253 256anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 243first strand
Strand 2
B
284 285parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 317first strand
Strand 2
B
340 346anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 78first strand
Strand 2
C
81 86anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 100first strand
Strand 2
C
268 272anti-parallel
Strand 3
C
254 257anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
242 243first strand
Strand 2
C
284 285parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
311 317first strand
Strand 2
C
340 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il