Analysis of interatomic Contacts of Structural Units in PDB entry:
1MMO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MMO entry

There are 6 chains in PDB entry 1MMO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 6LYS 389
C
 GLU 6LYS 389
D
 ALA 15PHE 526
E
 ALA 15PHE 526
G
 LEU 4HIS 165
H
 LEU 4HIS 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 1MMO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
B1
B
13 20Right-handed alpha
Helix 2
B2
B
47 54Right-handed alpha
Helix 3
BA
B
105 128Right-handed alpha
Helix 4
BB
B
137 166Right-handed alpha
Helix 5
BC
B
175 201Right-handed alpha
Helix 6
B3
B
210 219Right-handed alpha
Helix 7
BD
B
226 234Right-handed alpha
Helix 8
BE
B
243 266Right-handed alpha
Helix 9
BF
B
280 301Right-handed alpha
Helix 10
BG
B
309 336Right-handed alpha
Helix 11
BH
B
348 364Right-handed alpha
Helix 12
B4
B
377 384Right-handed alpha
Helix 13
C1
C
13 20Right-handed alpha
Helix 14
C2
C
47 54Right-handed alpha
Helix 15
CA
C
105 128Right-handed alpha
Helix 16
CB
C
137 166Right-handed alpha
Helix 17
CC
C
175 201Right-handed alpha
Helix 18
C3
C
210 219Right-handed alpha
Helix 19
CD
C
226 234Right-handed alpha
Helix 20
CE
C
243 266Right-handed alpha
Helix 21
CF
C
280 301Right-handed alpha
Helix 22
CG
C
309 336Right-handed alpha
Helix 23
CH
C
348 364Right-handed alpha
Helix 24
C4
C
377 384Right-handed alpha
Helix 25
D1
D
24 34Right-handed alpha
Helix 26
A
D
63 89Right-handed alpha
Helix 27
DB
D
96 127Right-handed alpha
Helix 28
C
D
130 160Right-handed alpha
Helix 29
D2
D
171 177Right-handed alpha
Helix 30
DD
D
180 193Right-handed alpha
Helix 31
DE
D
196 227Right-handed alpha
Helix 32
DF
D
231 256Right-handed alpha
Helix 33
D3
D
261 266Right-handed alpha
Helix 34
G
D
267 292Right-handed alpha
Helix 35
DH
D
301 320Right-handed alpha
Helix 36
D4
D
331 339Right-handed alpha
Helix 37
D5
D
341 353Right-handed alpha
Helix 38
D6
D
365 375Right-handed alpha
Helix 39
D7
D
379 393Right-handed alpha
Helix 40
D8
D
403 412Right-handed alpha
Helix 41
D9
D
451 460Right-handed alpha
Helix 42
D10
D
468 474Right-handed alpha
Helix 43
D11
D
478 486Right-handed alpha
Helix 44
D12
D
509 515Right-handed alpha
Helix 45
E1
E
24 34Right-handed alpha
Helix 46
EA
E
63 89Right-handed alpha
Helix 47
EB
E
96 127Right-handed alpha
Helix 48
EC
E
130 160Right-handed alpha
Helix 49
E2
E
171 177Right-handed alpha
Helix 50
ED
E
180 193Right-handed alpha
Helix 51
EE
E
196 227Right-handed alpha
Helix 52
EF
E
231 256Right-handed alpha
Helix 53
E3
E
261 266Right-handed alpha
Helix 54
EG
E
267 292Right-handed alpha
Helix 55
EH
E
301 320Right-handed alpha
Helix 56
E4
E
331 339Right-handed alpha
Helix 57
E5
E
341 353Right-handed alpha
Helix 58
E6
E
365 375Right-handed alpha
Helix 59
E7
E
379 393Right-handed alpha
Helix 60
E8
E
403 412Right-handed alpha
Helix 61
E9
E
451 460Right-handed alpha
Helix 62
E10
E
468 474Right-handed alpha
Helix 63
E11
E
478 486Right-handed alpha
Helix 64
E12
E
509 515Right-handed alpha
Helix 65
G1
G
9 18Right-handed alpha
Helix 66
G2
G
25 38Right-handed alpha
Helix 67
G3
G
49 70Right-handed alpha
Helix 68
G4
G
73 80Right-handed alpha
Helix 69
G5
G
86 98Right-handed alpha
Helix 70
G6
G
106 116Right-handed alpha
Helix 71
G7
G
124 143Right-handed alpha
Helix 72
G8
G
151 158Right-handed alpha
Helix 73
H1
H
9 18Right-handed alpha
Helix 74
H2
H
25 38Right-handed alpha
Helix 75
H3
H
49 70Right-handed alpha
Helix 76
H4
H
73 80Right-handed alpha
Helix 77
H5
H
86 98Right-handed alpha
Helix 78
H6
H
106 116Right-handed alpha
Helix 79
H7
H
124 143Right-handed alpha
Helix 80
H8
H
151 158Right-handed alpha
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There are 4 sheets in PDB entry 1MMO. Click on sheet of interest to get list of strands forming it: DS1, DS2, ES1, ES2,

There are 2 strands in DS1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
413 419first strand
Strand 2
D
420 428anti-parallel
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There are 2 strands in DS2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
435 442first strand
Strand 2
D
443 449anti-parallel
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There are 2 strands in ES1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
413 419first strand
Strand 2
E
420 428anti-parallel
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There are 2 strands in ES2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
435 442first strand
Strand 2
E
443 449anti-parallel
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