Analysis of interatomic Contacts of Structural Units in PDB entry:
1MN1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MN1 entry

There is 1 chain in PDB entry 1MN1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ALA 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1MN1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 27Right-handed 310
Helix 2
2
A
35 49Right-handed alpha
Helix 3
3
A
57 59Right-handed 310
Helix 4
4
A
66 69Right-handed alpha
Helix 5
5
A
74 76Right-handed 310
Helix 6
6
A
78 80Right-handed 310
Helix 7
7
A
83 96Right-handed 310
Helix 8
8
A
102 116Right-handed alpha
Helix 9
9
A
148 159Right-handed alpha
Helix 10
10
A
163 175Right-handed alpha
Helix 11
11
A
200 206Right-handed alpha
Helix 12
12
A
240 247Right-handed alpha
Helix 13
13
A
252 258Right-handed alpha
Helix 14
14
A
262 278Right-handed alpha
Helix 15
15
A
283 285Right-handed 310
Helix 16
16
A
290 292Right-handed 310
Helix 17
17
A
312 314Right-handed 310
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There are 3 sheets in PDB entry 1MN1. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
287 288anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
188 189anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 222first strand
Strand 2
A
238 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il