Analysis of interatomic Contacts of Structural Units in PDB entry:
1MN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MN6 entry

There are 2 chains in PDB entry 1MN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9ALA 289
B
 ALA 9GLU 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1MN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 22Right-handed alpha
Helix 2
2
A
24 37Right-handed alpha
Helix 3
3
A
86 91Right-handed alpha
Helix 4
4
A
121 138Right-handed alpha
Helix 5
5
A
148 165Right-handed alpha
Helix 6
6
A
183 189Right-handed alpha
Helix 7
7
A
189 200Right-handed alpha
Helix 8
8
A
206 220Right-handed alpha
Helix 9
9
A
269 274Right-handed alpha
Helix 10
10
A
275 289Right-handed alpha
Helix 11
11
B
10 22Right-handed alpha
Helix 12
12
B
24 37Right-handed alpha
Helix 13
13
B
44 48Right-handed 310
Helix 14
14
B
82 85Right-handed 310
Helix 15
15
B
86 91Right-handed alpha
Helix 16
16
B
92 94Right-handed 310
Helix 17
17
B
121 138Right-handed alpha
Helix 18
18
B
148 164Right-handed alpha
Helix 19
19
B
183 189Right-handed alpha
Helix 20
20
B
189 197Right-handed alpha
Helix 21
21
B
206 222Right-handed alpha
Helix 22
22
B
245 249Right-handed 310
Helix 23
23
B
269 273Right-handed 310
Helix 24
24
B
275 291Right-handed alpha
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There are 4 sheets in PDB entry 1MN6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
118 119parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
99 102anti-parallel
Strand 3
A
70 74parallel
Strand 4
A
142 147parallel
Strand 5
A
171 175parallel
Strand 6
A
232 237parallel
Strand 7
A
260 264parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
118 119parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
99 102anti-parallel
Strand 3
B
70 74parallel
Strand 4
B
142 147parallel
Strand 5
B
171 175parallel
Strand 6
B
232 237parallel
Strand 7
B
260 264parallel
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