Analysis of interatomic Contacts of Structural Units in PDB entry:
1MNM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MNM entry

There are 6 chains in PDB entry 1MNM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 G 1 G 26
F
 C 27 T 52
A
 GLN 15ASP 99
B
 ARG 18ASP 98
C
 GLY 113THR 189
D
 GLY 113THR 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1MNM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 54Right-handed alpha
Helix 2
2
A
75 82Right-handed alpha
Helix 3
3
A
84 95Right-handed alpha
Helix 4
4
B
29 54Right-handed alpha
Helix 5
5
B
75 82Right-handed 310
Helix 6
6
B
84 95Right-handed alpha
Helix 7
7
C
138 152Right-handed alpha
Helix 8
8
C
159 169Right-handed alpha
Helix 9
9
C
173 187Right-handed alpha
Helix 10
10
D
121 128Right-handed alpha
Helix 11
12
D
138 152Right-handed alpha
Helix 12
14
D
159 169Right-handed alpha
Helix 13
15
D
173 187Right-handed alpha
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There are 2 sheets in PDB entry 1MNM. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
57 63anti-parallel
Strand 3
B
57 63anti-parallel
Strand 4
B
69 73anti-parallel
Strand 5
C
115 120parallel
Strand 6
C
125 127anti-parallel
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There are 1 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 120first strand
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