Analysis of interatomic Contacts of Structural Units in PDB entry:
1MRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MRU entry

There are 2 chains in PDB entry 1MRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LYS 286
B
 MET 1LYS 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1MRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 9Right-handed 310
Helix 2
2
A
51 65Right-handed alpha
Helix 3
3
A
100 107Right-handed alpha
Helix 4
4
A
111 132Right-handed alpha
Helix 5
5
A
184 189Right-handed alpha
Helix 6
6
A
194 212Right-handed alpha
Helix 7
7
A
220 229Right-handed alpha
Helix 8
8
A
235 240Right-handed alpha
Helix 9
9
A
244 255Right-handed alpha
Helix 10
10
A
258 262Right-handed 310
Helix 11
11
A
265 278Right-handed alpha
Helix 12
12
B
51 65Right-handed alpha
Helix 13
13
B
100 106Right-handed alpha
Helix 14
14
B
111 132Right-handed alpha
Helix 15
15
B
140 142Right-handed 310
Helix 16
16
B
184 190Right-handed alpha
Helix 17
17
B
194 211Right-handed alpha
Helix 18
18
B
220 231Right-handed alpha
Helix 19
19
B
244 255Right-handed alpha
Helix 20
20
B
258 262Right-handed 310
Helix 21
21
B
265 279Right-handed alpha
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There are 5 sheets in PDB entry 1MRU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 19first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
35 42anti-parallel
Strand 4
A
85 93anti-parallel
Strand 5
A
74 82anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
144 147anti-parallel
Strand 3
A
152 154anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
161 162anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
11 19anti-parallel
Strand 3
B
23 30anti-parallel
Strand 4
B
35 42anti-parallel
Strand 5
B
86 92anti-parallel
Strand 6
B
74 81anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 99first strand
Strand 2
B
144 147anti-parallel
Strand 3
B
152 154anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il