Analysis of interatomic Contacts of Structural Units in PDB entry:
1MTN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MTN entry

There are 8 chains in PDB entry 1MTN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1SER 11
B
 ILE 16TYR 146
C
 ALA 149ASN 245
D
 ARG 301ALA 358
E
 CYS 1SER 11
F
 ILE 16TYR 146
G
 ALA 149ASN 245
H
 ARG 301ALA 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1MTN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
56 58Right-handed 310
Helix 2
2
C
165 175Right-handed alpha
Helix 3
3
C
231 244Right-handed alpha
Helix 4
4
D
304 306Right-handed 310
Helix 5
5
D
348 355Right-handed alpha
Helix 6
6
F
56 58Right-handed 310
Helix 7
7
G
165 175Right-handed alpha
Helix 8
8
G
203 205Right-handed 310
Helix 9
9
G
231 244Right-handed alpha
Helix 10
10
H
303 306Right-handed 310
Helix 11
11
H
348 355Right-handed alpha
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There are 7 sheets in PDB entry 1MTN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 84first strand
Strand 2
B
65 68anti-parallel
Strand 3
B
30 34anti-parallel
Strand 4
B
40 48anti-parallel
Strand 5
B
51 54anti-parallel
Strand 6
B
104 108anti-parallel
Strand 7
B
85 90anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 161first strand
Strand 2
B
135 140anti-parallel
Strand 3
C
198 203anti-parallel
Strand 4
C
206 215anti-parallel
Strand 5
C
225 230anti-parallel
Strand 6
C
180 184anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
318 324first strand
Strand 2
D
329 335anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
81 84first strand
Strand 2
F
65 68anti-parallel
Strand 3
F
30 34anti-parallel
Strand 4
F
40 45anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
51 54first strand
Strand 2
F
104 108anti-parallel
Strand 3
F
85 90anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
156 161first strand
Strand 2
F
135 140anti-parallel
Strand 3
G
198 201anti-parallel
Strand 4
G
208 216anti-parallel
Strand 5
G
225 230anti-parallel
Strand 6
G
180 184anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
318 324first strand
Strand 2
H
329 335anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il