Analysis of interatomic Contacts of Structural Units in PDB entry:
1MUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MUM entry

There are 2 chains in PDB entry 1MUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ALA 291
B
 LEU 3ALA 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1MUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 17Right-handed alpha
Helix 2
2
A
27 37Right-handed alpha
Helix 3
3
A
45 52Right-handed alpha
Helix 4
4
A
63 78Right-handed alpha
Helix 5
5
A
93 107Right-handed alpha
Helix 6
6
A
133 147Right-handed alpha
Helix 7
7
A
161 166Right-handed alpha
Helix 8
8
A
166 180Right-handed alpha
Helix 9
9
A
192 204Right-handed alpha
Helix 10
10
A
221 228Right-handed alpha
Helix 11
11
A
237 258Right-handed alpha
Helix 12
12
A
260 267Right-handed 310
Helix 13
13
A
269 277Right-handed alpha
Helix 14
14
A
279 290Right-handed alpha
Helix 15
15
B
5 17Right-handed alpha
Helix 16
16
B
27 37Right-handed alpha
Helix 17
17
B
45 52Right-handed alpha
Helix 18
18
B
63 78Right-handed alpha
Helix 19
19
B
93 108Right-handed alpha
Helix 20
20
B
133 148Right-handed alpha
Helix 21
21
B
160 166Right-handed alpha
Helix 22
22
B
166 180Right-handed alpha
Helix 23
23
B
192 204Right-handed alpha
Helix 24
24
B
221 228Right-handed alpha
Helix 25
25
B
237 258Right-handed alpha
Helix 26
26
B
260 267Right-handed 310
Helix 27
27
B
269 277Right-handed alpha
Helix 28
28
B
279 290Right-handed alpha
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There are 2 sheets in PDB entry 1MUM. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
154 159parallel
Strand 3
A
111 115parallel
Strand 4
A
82 85parallel
Strand 5
A
42 44parallel
Strand 6
A
20 24parallel
Strand 7
A
232 235parallel
Strand 8
A
208 210parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 187first strand
Strand 2
B
154 159parallel
Strand 3
B
111 115parallel
Strand 4
B
82 85parallel
Strand 5
B
42 44parallel
Strand 6
B
20 24parallel
Strand 7
B
232 235parallel
Strand 8
B
208 210parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il