Analysis of interatomic Contacts of Structural Units in PDB entry:
1MVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MVV entry

There is 1 chain in PDB entry 1MVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 22ASN 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1MVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 37Right-handed alpha
Helix 2
2
A
41 69Right-handed alpha
Helix 3
3
A
78 82Right-handed 310
Helix 4
4
A
84 92Right-handed alpha
Helix 5
5
A
120 124Right-handed alpha
Helix 6
6
A
137 156Right-handed alpha
Helix 7
7
A
163 170Right-handed alpha
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
182 194Right-handed alpha
Helix 10
10
A
231 242Right-handed alpha
Helix 11
11
A
253 258Right-handed alpha
Helix 12
12
A
320 324Right-handed 310
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There are 3 sheets in PDB entry 1MVV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
276 284anti-parallel
Strand 3
A
118 119anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
276 284anti-parallel
Strand 3
A
295 299anti-parallel
Strand 4
A
311 315anti-parallel
Strand 5
A
259 264parallel
Strand 6
A
73 75anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
223 227parallel
Strand 3
A
329 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il