Analysis of interatomic Contacts of Structural Units in PDB entry:
1MW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MW3 entry

There is 1 chain in PDB entry 1MW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 1ALA 628
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1MW3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
16 26Right-handed alpha
Helix 3
3
A
26 52Right-handed alpha
Helix 4
4
A
56 75Right-handed alpha
Helix 5
5
A
76 89Right-handed alpha
Helix 6
6
A
90 95Right-handed 310
Helix 7
7
A
104 110Right-handed alpha
Helix 8
8
A
111 126Right-handed alpha
Helix 9
9
A
161 175Right-handed alpha
Helix 10
10
A
192 200Right-handed alpha
Helix 11
11
A
202 206Right-handed 310
Helix 12
12
A
215 223Right-handed alpha
Helix 13
13
A
261 277Right-handed alpha
Helix 14
14
A
287 291Right-handed 310
Helix 15
15
A
302 320Right-handed alpha
Helix 16
16
A
332 337Right-handed alpha
Helix 17
17
A
338 340Right-handed 310
Helix 18
18
A
350 364Right-handed alpha
Helix 19
19
A
366 376Right-handed alpha
Helix 20
20
A
400 407Right-handed alpha
Helix 21
21
A
410 423Right-handed alpha
Helix 22
22
A
450 455Right-handed alpha
Helix 23
23
A
456 460Right-handed 310
Helix 24
24
A
463 478Right-handed alpha
Helix 25
25
A
487 491Right-handed 310
Helix 26
26
A
497 501Right-handed 310
Helix 27
27
A
507 513Right-handed 310
Helix 28
28
A
517 523Right-handed alpha
Helix 29
29
A
529 548Right-handed alpha
Helix 30
30
A
549 552Right-handed 310
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There are 6 sheets in PDB entry 1MW3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 103first strand
Strand 2
A
129 132parallel
Strand 3
A
178 183parallel
Strand 4
A
282 285parallel
Strand 5
A
324 327parallel
Strand 6
A
347 349parallel
Strand 7
A
384 388parallel
Strand 8
A
481 485parallel
Strand 9
A
100 103parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
187 189first strand
Strand 2
A
254 256anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
211 212first strand
Strand 2
A
245 247anti-parallel
Strand 3
A
237 239anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
434 436first strand
Strand 2
A
446 448anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
557 558first strand
Strand 2
A
566 571anti-parallel
Strand 3
A
575 580anti-parallel
Strand 4
A
622 626anti-parallel
Strand 5
A
599 602anti-parallel
Strand 6
A
608 610anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
586 588first strand
Strand 2
A
615 617anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il