Analysis of interatomic Contacts of Structural Units in PDB entry:
1MWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MWS entry

There are 4 chains in PDB entry 1MWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 27GLY 402
A
 THR 404GLU 668
B
 ASP 27GLY 402
B
 THR 404GLU 668
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 1MWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 39Right-handed alpha
Helix 2
2
A
41 48Right-handed alpha
Helix 3
3
A
50 58Right-handed alpha
Helix 4
4
A
58 64Right-handed alpha
Helix 5
5
A
64 74Right-handed alpha
Helix 6
6
A
128 132Right-handed 310
Helix 7
7
A
179 181Right-handed 310
Helix 8
8
A
182 190Right-handed alpha
Helix 9
9
A
193 201Right-handed alpha
Helix 10
10
A
221 232Right-handed alpha
Helix 11
11
A
245 248Right-handed 310
Helix 12
12
A
249 254Right-handed alpha
Helix 13
13
A
260 265Right-handed alpha
Helix 14
14
A
266 270Right-handed 310
Helix 15
15
A
281 287Right-handed alpha
Helix 16
16
A
287 292Right-handed alpha
Helix 17
17
A
329 341Right-handed alpha
Helix 18
18
A
368 374Right-handed alpha
Helix 19
19
A
376 386Right-handed alpha
Helix 20
20
A
401 403Right-handed 310
Helix 21
21
A
404 416Right-handed alpha
Helix 22
22
A
435 439Right-handed 310
Helix 23
23
A
455 461Right-handed alpha
Helix 24
24
A
463 475Right-handed alpha
Helix 25
25
A
475 486Right-handed alpha
Helix 26
26
A
510 519Right-handed alpha
Helix 27
27
A
527 536Right-handed alpha
Helix 28
28
A
537 540Right-handed 310
Helix 29
29
A
564 581Right-handed alpha
Helix 30
30
A
641 657Right-handed alpha
Helix 31
31
A
658 661Right-handed 310
Helix 32
32
B
27 39Right-handed alpha
Helix 33
33
B
41 48Right-handed alpha
Helix 34
34
B
50 58Right-handed alpha
Helix 35
35
B
58 64Right-handed alpha
Helix 36
36
B
64 74Right-handed alpha
Helix 37
37
B
128 132Right-handed 310
Helix 38
38
B
174 178Right-handed 310
Helix 39
39
B
179 181Right-handed 310
Helix 40
40
B
182 190Right-handed alpha
Helix 41
41
B
193 203Right-handed alpha
Helix 42
42
B
221 232Right-handed alpha
Helix 43
43
B
245 248Right-handed 310
Helix 44
44
B
249 254Right-handed alpha
Helix 45
45
B
260 266Right-handed alpha
Helix 46
46
B
282 287Right-handed alpha
Helix 47
47
B
287 292Right-handed alpha
Helix 48
48
B
329 339Right-handed alpha
Helix 49
49
B
368 374Right-handed alpha
Helix 50
50
B
376 385Right-handed alpha
Helix 51
51
B
401 403Right-handed 310
Helix 52
52
B
404 416Right-handed alpha
Helix 53
53
B
435 439Right-handed 310
Helix 54
54
B
455 461Right-handed alpha
Helix 55
55
B
463 486Right-handed alpha
Helix 56
56
B
510 519Right-handed alpha
Helix 57
57
B
527 536Right-handed alpha
Helix 58
58
B
537 540Right-handed 310
Helix 59
59
B
564 581Right-handed alpha
Helix 60
60
B
583 588Right-handed alpha
Helix 61
61
B
642 657Right-handed alpha
Helix 62
62
B
658 661Right-handed 310
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There are 19 sheets in PDB entry 1MWS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 89first strand
Strand 2
A
92 103anti-parallel
Strand 3
A
106 118anti-parallel
Strand 4
A
123 125anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 147first strand
Strand 2
A
296 303anti-parallel
Strand 3
A
309 316anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 242first strand
Strand 2
A
161 173anti-parallel
Strand 3
A
154 155anti-parallel
Strand 4
A
324 325parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 242first strand
Strand 2
A
161 173anti-parallel
Strand 3
A
212 217anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
277 279anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 363first strand
Strand 2
A
345 350anti-parallel
Strand 3
A
628 634anti-parallel
Strand 4
A
614 621anti-parallel
Strand 5
A
594 601anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
451 454anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
443 444anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 545first strand
Strand 2
A
557 559anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 86first strand
Strand 2
B
94 103anti-parallel
Strand 3
B
106 118anti-parallel
Strand 4
B
123 125anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 147first strand
Strand 2
B
296 303anti-parallel
Strand 3
B
309 316anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 242first strand
Strand 2
B
161 173anti-parallel
Strand 3
B
154 155anti-parallel
Strand 4
B
324 325parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 242first strand
Strand 2
B
161 173anti-parallel
Strand 3
B
212 217anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 258first strand
Strand 2
B
277 281anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 363first strand
Strand 2
B
345 350anti-parallel
Strand 3
B
628 634anti-parallel
Strand 4
B
613 621anti-parallel
Strand 5
B
594 597anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 363first strand
Strand 2
B
345 350anti-parallel
Strand 3
B
628 634anti-parallel
Strand 4
B
613 621anti-parallel
Strand 5
B
600 602anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
424 427first strand
Strand 2
B
451 454anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
443 444anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
544 545first strand
Strand 2
B
557 559anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il