Analysis of interatomic Contacts of Structural Units in PDB entry:
1MX0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1MX0 entry

There are 6 chains in PDB entry 1MX0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 4	LYS 467
B	LYS 4	LYS 458
C	LYS 4	LEU 469
D	LYS 4	ALA 464
E	LYS 4	GLU 461
F	LYS 4	GLU 463

There are110 helices in PDB entry 1MX0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	19	Right-handed alpha
Helix 2	2	A	20	24	Right-handed 310
Helix 3	3	A	27	48	Right-handed alpha
Helix 4	4	A	49	51	Right-handed 310
Helix 5	5	A	82	84	Right-handed 310
Helix 6	6	A	85	92	Right-handed alpha
Helix 7	7	A	110	123	Right-handed alpha
Helix 8	8	A	179	197	Right-handed alpha
Helix 9	9	A	237	248	Right-handed alpha
Helix 10	10	A	253	262	Right-handed alpha
Helix 11	11	A	266	277	Right-handed alpha
Helix 12	12	A	284	288	Right-handed 310
Helix 13	13	A	289	303	Right-handed alpha
Helix 14	14	A	310	314	Right-handed 310
Helix 15	15	A	318	331	Right-handed alpha
Helix 16	16	A	382	385	Right-handed 310
Helix 17	17	A	386	395	Right-handed alpha
Helix 18	18	A	396	400	Right-handed 310
Helix 19	19	A	433	467	Right-handed alpha
Helix 20	20	B	11	19	Right-handed alpha
Helix 21	21	B	20	24	Right-handed 310
Helix 22	22	B	27	48	Right-handed alpha
Helix 23	23	B	49	51	Right-handed 310
Helix 24	24	B	82	84	Right-handed 310
Helix 25	25	B	85	92	Right-handed alpha
Helix 26	26	B	110	123	Right-handed alpha
Helix 27	27	B	179	197	Right-handed alpha
Helix 28	28	B	237	247	Right-handed alpha
Helix 29	29	B	253	262	Right-handed alpha
Helix 30	30	B	266	278	Right-handed alpha
Helix 31	31	B	284	288	Right-handed 310
Helix 32	32	B	289	302	Right-handed alpha
Helix 33	33	B	318	331	Right-handed alpha
Helix 34	34	B	382	385	Right-handed 310
Helix 35	35	B	386	395	Right-handed alpha
Helix 36	36	B	396	400	Right-handed 310
Helix 37	37	B	433	458	Right-handed alpha
Helix 38	38	C	11	19	Right-handed alpha
Helix 39	39	C	20	24	Right-handed 310
Helix 40	40	C	27	46	Right-handed alpha
Helix 41	41	C	47	51	Right-handed 310
Helix 42	42	C	82	84	Right-handed 310
Helix 43	43	C	85	92	Right-handed alpha
Helix 44	44	C	110	123	Right-handed alpha
Helix 45	45	C	179	197	Right-handed alpha
Helix 46	46	C	237	247	Right-handed alpha
Helix 47	47	C	253	262	Right-handed alpha
Helix 48	48	C	266	278	Right-handed alpha
Helix 49	49	C	284	288	Right-handed 310
Helix 50	50	C	289	303	Right-handed alpha
Helix 51	51	C	310	314	Right-handed 310
Helix 52	52	C	318	331	Right-handed alpha
Helix 53	53	C	382	385	Right-handed 310
Helix 54	54	C	386	395	Right-handed alpha
Helix 55	55	C	396	400	Right-handed 310
Helix 56	56	C	433	469	Right-handed alpha
Helix 57	57	D	11	19	Right-handed alpha
Helix 58	58	D	20	24	Right-handed 310
Helix 59	59	D	27	46	Right-handed alpha
Helix 60	60	D	47	51	Right-handed 310
Helix 61	61	D	82	84	Right-handed 310
Helix 62	62	D	85	92	Right-handed alpha
Helix 63	63	D	110	123	Right-handed alpha
Helix 64	64	D	179	196	Right-handed alpha
Helix 65	65	D	237	247	Right-handed alpha
Helix 66	66	D	253	262	Right-handed alpha
Helix 67	67	D	266	278	Right-handed alpha
Helix 68	68	D	284	288	Right-handed 310
Helix 69	69	D	289	303	Right-handed alpha
Helix 70	70	D	310	314	Right-handed 310
Helix 71	71	D	318	331	Right-handed alpha
Helix 72	72	D	382	385	Right-handed 310
Helix 73	73	D	386	395	Right-handed alpha
Helix 74	74	D	397	401	Right-handed 310
Helix 75	75	D	433	464	Right-handed alpha
Helix 76	76	E	11	19	Right-handed alpha
Helix 77	77	E	20	24	Right-handed 310
Helix 78	78	E	27	46	Right-handed alpha
Helix 79	79	E	47	51	Right-handed 310
Helix 80	80	E	82	84	Right-handed 310
Helix 81	81	E	85	92	Right-handed alpha
Helix 82	82	E	110	123	Right-handed alpha
Helix 83	83	E	179	197	Right-handed alpha
Helix 84	84	E	237	247	Right-handed alpha
Helix 85	85	E	253	262	Right-handed alpha
Helix 86	86	E	266	278	Right-handed alpha
Helix 87	87	E	284	288	Right-handed 310
Helix 88	88	E	289	303	Right-handed alpha
Helix 89	89	E	310	314	Right-handed 310
Helix 90	90	E	318	331	Right-handed alpha
Helix 91	91	E	382	385	Right-handed 310
Helix 92	92	E	386	395	Right-handed alpha
Helix 93	93	E	433	461	Right-handed alpha
Helix 94	94	F	11	19	Right-handed alpha
Helix 95	95	F	20	24	Right-handed 310
Helix 96	96	F	27	49	Right-handed alpha
Helix 97	97	F	82	85	Right-handed 310
Helix 98	98	F	86	92	Right-handed alpha
Helix 99	99	F	110	123	Right-handed alpha
Helix 100	100	F	183	196	Right-handed alpha
Helix 101	101	F	237	247	Right-handed alpha
Helix 102	102	F	253	261	Right-handed alpha
Helix 103	103	F	266	278	Right-handed alpha
Helix 104	104	F	284	288	Right-handed 310
Helix 105	105	F	289	303	Right-handed alpha
Helix 106	106	F	321	328	Right-handed alpha
Helix 107	107	F	382	385	Right-handed 310
Helix 108	108	F	386	394	Right-handed alpha
Helix 109	109	F	396	401	Right-handed alpha
Helix 110	110	F	433	463	Right-handed alpha

There are 24 sheets in PDB entry 1MX0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	B	95	96	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	162	first strand
Strand 2	A	138	147	anti-parallel
Strand 3	A	127	132	anti-parallel
Strand 4	A	169	177	anti-parallel
Strand 5	A	69	76	anti-parallel
Strand 6	A	55	64	anti-parallel
Strand 7	A	202	206	parallel
Strand 8	A	212	215	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	96	first strand
Strand 2	B	8	9	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	369	374	anti-parallel
Strand 3	A	409	417	parallel
Strand 4	A	348	358	anti-parallel
Strand 5	A	334	339	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	369	374	anti-parallel
Strand 3	A	409	417	parallel
Strand 4	A	348	358	anti-parallel
Strand 5	A	343	345	anti-parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	162	first strand
Strand 2	B	138	147	anti-parallel
Strand 3	B	127	132	anti-parallel
Strand 4	B	169	177	anti-parallel
Strand 5	B	69	76	anti-parallel
Strand 6	B	55	64	anti-parallel
Strand 7	B	202	206	parallel
Strand 8	B	212	215	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	379	first strand
Strand 2	B	369	374	anti-parallel
Strand 3	B	410	417	parallel
Strand 4	B	348	357	anti-parallel
Strand 5	B	335	339	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	379	first strand
Strand 2	B	369	374	anti-parallel
Strand 3	B	410	417	parallel
Strand 4	B	348	357	anti-parallel
Strand 5	B	343	345	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	D	95	96	anti-parallel

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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	162	first strand
Strand 2	C	138	147	anti-parallel
Strand 3	C	127	132	anti-parallel
Strand 4	C	169	177	anti-parallel
Strand 5	C	69	75	anti-parallel
Strand 6	C	55	64	anti-parallel
Strand 7	C	202	206	parallel
Strand 8	C	212	215	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	D	8	9	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	379	first strand
Strand 2	C	369	374	anti-parallel
Strand 3	C	409	417	parallel
Strand 4	C	348	358	anti-parallel
Strand 5	C	334	339	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	379	first strand
Strand 2	C	369	374	anti-parallel
Strand 3	C	409	417	parallel
Strand 4	C	348	358	anti-parallel
Strand 5	C	343	345	anti-parallel

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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	162	first strand
Strand 2	D	138	147	anti-parallel
Strand 3	D	127	132	anti-parallel
Strand 4	D	169	177	anti-parallel
Strand 5	D	69	76	anti-parallel
Strand 6	D	55	64	anti-parallel
Strand 7	D	202	206	parallel
Strand 8	D	212	215	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	379	first strand
Strand 2	D	369	374	anti-parallel
Strand 3	D	410	417	parallel
Strand 4	D	348	357	anti-parallel
Strand 5	D	335	339	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	379	first strand
Strand 2	D	369	374	anti-parallel
Strand 3	D	410	417	parallel
Strand 4	D	348	357	anti-parallel
Strand 5	D	343	345	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	9	first strand
Strand 2	F	95	96	anti-parallel

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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	162	first strand
Strand 2	E	138	147	anti-parallel
Strand 3	E	127	132	anti-parallel
Strand 4	E	169	177	anti-parallel
Strand 5	E	69	76	anti-parallel
Strand 6	E	55	64	anti-parallel
Strand 7	E	202	206	parallel
Strand 8	E	212	215	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	F	8	9	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	377	379	first strand
Strand 2	E	369	374	anti-parallel
Strand 3	E	409	417	parallel
Strand 4	E	348	358	anti-parallel
Strand 5	E	334	339	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	377	379	first strand
Strand 2	E	369	374	anti-parallel
Strand 3	E	409	417	parallel
Strand 4	E	348	358	anti-parallel
Strand 5	E	343	345	anti-parallel

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There are 8 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	161	first strand
Strand 2	F	139	144	anti-parallel
Strand 3	F	127	131	anti-parallel
Strand 4	F	170	177	anti-parallel
Strand 5	F	69	76	anti-parallel
Strand 6	F	55	64	anti-parallel
Strand 7	F	202	206	parallel
Strand 8	F	213	215	anti-parallel

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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	377	379	first strand
Strand 2	F	369	374	anti-parallel
Strand 3	F	410	417	parallel
Strand 4	F	348	357	anti-parallel
Strand 5	F	335	339	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	377	379	first strand
Strand 2	F	369	374	anti-parallel
Strand 3	F	410	417	parallel
Strand 4	F	348	357	anti-parallel
Strand 5	F	343	345	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1MX0

Analysis of interatomic Contacts of Structural Units in PDB entry:
1MX0