Analysis of interatomic Contacts of Structural Units in PDB entry:
1MX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MX5 entry

There are 6 chains in PDB entry 1MX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1021LYS 1553
B
 SER 2022LYS 2553
C
 SER 3022LYS 3553
D
 SER 4021LYS 4553
E
 SER 5022LYS 5553
F
 SER 6022LYS 6553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are140 helices in PDB entry 1MX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1060 1064Right-handed 310
Helix 2
2
A
1090 1102Right-handed alpha
Helix 3
3
A
1154 1162Right-handed alpha
Helix 4
4
A
1172 1178Right-handed alpha
Helix 5
5
A
1188 1205Right-handed alpha
Helix 6
6
A
1206 1208Right-handed 310
Helix 7
7
A
1221 1233Right-handed alpha
Helix 8
8
A
1234 1237Right-handed 310
Helix 9
9
A
1252 1256Right-handed 310
Helix 10
10
A
1261 1272Right-handed alpha
Helix 11
11
A
1278 1289Right-handed alpha
Helix 12
12
A
1290 1302Right-handed alpha
Helix 13
13
A
1331 1336Right-handed alpha
Helix 14
14
A
1357 1364Right-handed alpha
Helix 15
15
A
1374 1385Right-handed alpha
Helix 16
16
A
1385 1390Right-handed alpha
Helix 17
17
A
1395 1405Right-handed alpha
Helix 18
18
A
1409 1426Right-handed alpha
Helix 19
19
A
1426 1440Right-handed alpha
Helix 20
20
A
1471 1476Right-handed alpha
Helix 21
21
A
1477 1481Right-handed 310
Helix 22
22
A
1486 1507Right-handed alpha
Helix 23
23
A
1540 1552Right-handed alpha
Helix 24
24
B
2060 2064Right-handed 310
Helix 25
25
B
2090 2102Right-handed alpha
Helix 26
26
B
2154 2162Right-handed alpha
Helix 27
27
B
2172 2178Right-handed alpha
Helix 28
28
B
2188 2205Right-handed alpha
Helix 29
29
B
2206 2208Right-handed 310
Helix 30
30
B
2221 2233Right-handed alpha
Helix 31
31
B
2234 2237Right-handed 310
Helix 32
32
B
2261 2272Right-handed alpha
Helix 33
33
B
2278 2289Right-handed alpha
Helix 34
34
B
2290 2302Right-handed alpha
Helix 35
35
B
2311 2315Right-handed 310
Helix 36
36
B
2331 2338Right-handed alpha
Helix 37
37
B
2357 2364Right-handed alpha
Helix 38
38
B
2374 2385Right-handed alpha
Helix 39
39
B
2385 2390Right-handed alpha
Helix 40
40
B
2395 2405Right-handed alpha
Helix 41
41
B
2409 2426Right-handed alpha
Helix 42
42
B
2426 2440Right-handed alpha
Helix 43
43
B
2471 2476Right-handed alpha
Helix 44
44
B
2477 2482Right-handed alpha
Helix 45
45
B
2486 2507Right-handed alpha
Helix 46
46
B
2540 2551Right-handed alpha
Helix 47
47
C
3060 3064Right-handed 310
Helix 48
48
C
3090 3102Right-handed alpha
Helix 49
49
C
3154 3162Right-handed alpha
Helix 50
50
C
3172 3178Right-handed alpha
Helix 51
51
C
3188 3205Right-handed alpha
Helix 52
52
C
3206 3208Right-handed 310
Helix 53
53
C
3221 3233Right-handed alpha
Helix 54
54
C
3252 3256Right-handed 310
Helix 55
55
C
3261 3272Right-handed alpha
Helix 56
56
C
3278 3289Right-handed alpha
Helix 57
57
C
3290 3301Right-handed alpha
Helix 58
58
C
3311 3315Right-handed 310
Helix 59
59
C
3331 3337Right-handed alpha
Helix 60
60
C
3357 3364Right-handed alpha
Helix 61
61
C
3374 3385Right-handed alpha
Helix 62
62
C
3385 3390Right-handed alpha
Helix 63
63
C
3395 3404Right-handed alpha
Helix 64
64
C
3409 3426Right-handed alpha
Helix 65
65
C
3426 3440Right-handed alpha
Helix 66
66
C
3471 3476Right-handed alpha
Helix 67
67
C
3477 3481Right-handed 310
Helix 68
68
C
3486 3507Right-handed alpha
Helix 69
69
C
3540 3553Right-handed alpha
Helix 70
70
D
4060 4064Right-handed 310
Helix 71
71
D
4090 4102Right-handed alpha
Helix 72
72
D
4148 4152Right-handed 310
Helix 73
73
D
4154 4162Right-handed alpha
Helix 74
74
D
4172 4178Right-handed alpha
Helix 75
75
D
4188 4205Right-handed alpha
Helix 76
76
D
4206 4208Right-handed 310
Helix 77
77
D
4221 4233Right-handed alpha
Helix 78
78
D
4234 4240Right-handed 310
Helix 79
79
D
4252 4256Right-handed 310
Helix 80
80
D
4261 4272Right-handed alpha
Helix 81
81
D
4278 4289Right-handed alpha
Helix 82
82
D
4290 4302Right-handed alpha
Helix 83
83
D
4311 4315Right-handed 310
Helix 84
84
D
4331 4336Right-handed alpha
Helix 85
85
D
4357 4364Right-handed alpha
Helix 86
86
D
4374 4385Right-handed alpha
Helix 87
87
D
4385 4390Right-handed alpha
Helix 88
88
D
4392 4394Right-handed 310
Helix 89
89
D
4395 4405Right-handed alpha
Helix 90
90
D
4409 4426Right-handed alpha
Helix 91
91
D
4426 4440Right-handed alpha
Helix 92
92
D
4471 4476Right-handed alpha
Helix 93
93
D
4477 4481Right-handed 310
Helix 94
94
D
4486 4507Right-handed alpha
Helix 95
95
D
4540 4551Right-handed alpha
Helix 96
96
E
5060 5064Right-handed 310
Helix 97
97
E
5090 5102Right-handed alpha
Helix 98
98
E
5154 5162Right-handed alpha
Helix 99
99
E
5172 5178Right-handed alpha
Helix 100
100
E
5188 5205Right-handed alpha
Helix 101
101
E
5206 5208Right-handed 310
Helix 102
102
E
5221 5233Right-handed alpha
Helix 103
103
E
5252 5256Right-handed 310
Helix 104
104
E
5261 5272Right-handed alpha
Helix 105
105
E
5278 5288Right-handed alpha
Helix 106
106
E
5290 5301Right-handed alpha
Helix 107
107
E
5331 5338Right-handed alpha
Helix 108
108
E
5357 5364Right-handed alpha
Helix 109
109
E
5374 5385Right-handed alpha
Helix 110
110
E
5385 5390Right-handed alpha
Helix 111
111
E
5395 5405Right-handed alpha
Helix 112
112
E
5409 5426Right-handed alpha
Helix 113
113
E
5426 5440Right-handed alpha
Helix 114
114
E
5471 5476Right-handed alpha
Helix 115
115
E
5477 5481Right-handed 310
Helix 116
116
E
5486 5507Right-handed alpha
Helix 117
117
E
5540 5553Right-handed alpha
Helix 118
118
F
6060 6064Right-handed 310
Helix 119
119
F
6090 6102Right-handed alpha
Helix 120
120
F
6154 6162Right-handed alpha
Helix 121
121
F
6172 6178Right-handed alpha
Helix 122
122
F
6188 6205Right-handed alpha
Helix 123
123
F
6206 6208Right-handed 310
Helix 124
124
F
6221 6231Right-handed alpha
Helix 125
125
F
6232 6237Right-handed 310
Helix 126
126
F
6252 6256Right-handed 310
Helix 127
127
F
6261 6272Right-handed alpha
Helix 128
128
F
6278 6289Right-handed alpha
Helix 129
129
F
6290 6301Right-handed alpha
Helix 130
130
F
6331 6338Right-handed alpha
Helix 131
131
F
6357 6364Right-handed alpha
Helix 132
132
F
6374 6385Right-handed alpha
Helix 133
133
F
6385 6390Right-handed alpha
Helix 134
134
F
6395 6405Right-handed alpha
Helix 135
135
F
6409 6426Right-handed alpha
Helix 136
136
F
6426 6440Right-handed alpha
Helix 137
137
F
6471 6476Right-handed alpha
Helix 138
138
F
6477 6481Right-handed 310
Helix 139
139
F
6486 6507Right-handed alpha
Helix 140
140
F
6540 6553Right-handed alpha
Back to top of page

There are 17 sheets in PDB entry 1MX5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1025 1028first strand
Strand 2
A
1031 1034anti-parallel
Strand 3
A
1077 1079parallel
Back to list of sheets
Back to top of page

There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1036 1038first strand
Strand 2
A
1047 1054anti-parallel
Strand 3
A
1118 1123anti-parallel
Strand 4
A
1164 1168anti-parallel
Strand 5
A
1133 1139parallel
Strand 6
A
1210 1220parallel
Strand 7
A
1242 1246parallel
Strand 8
A
1346 1351parallel
Strand 9
A
1444 1450parallel
Strand 10
A
1525 1530parallel
Strand 11
A
1534 1537anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2025 2028first strand
Strand 2
B
2031 2034anti-parallel
Strand 3
B
2077 2079parallel
Back to list of sheets
Back to top of page

There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2036 2038first strand
Strand 2
B
2047 2054anti-parallel
Strand 3
B
2118 2123anti-parallel
Strand 4
B
2164 2168anti-parallel
Strand 5
B
2133 2139parallel
Strand 6
B
2210 2220parallel
Strand 7
B
2242 2246parallel
Strand 8
B
2346 2351parallel
Strand 9
B
2444 2450parallel
Strand 10
B
2525 2530parallel
Strand 11
B
2534 2537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2086 2087first strand
Strand 2
B
2112 2113parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3025 3028first strand
Strand 2
C
3031 3034anti-parallel
Strand 3
C
3077 3079parallel
Back to list of sheets
Back to top of page

There are 11 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3036 3038first strand
Strand 2
C
3047 3054anti-parallel
Strand 3
C
3118 3123anti-parallel
Strand 4
C
3164 3168anti-parallel
Strand 5
C
3133 3139parallel
Strand 6
C
3210 3220parallel
Strand 7
C
3242 3246parallel
Strand 8
C
3346 3351parallel
Strand 9
C
3444 3449parallel
Strand 10
C
3525 3529parallel
Strand 11
C
3534 3537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3086 3087first strand
Strand 2
C
3112 3113parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4025 4028first strand
Strand 2
D
4031 4034anti-parallel
Strand 3
D
4077 4079parallel
Back to list of sheets
Back to top of page

There are 11 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4036 4038first strand
Strand 2
D
4047 4054anti-parallel
Strand 3
D
4118 4123anti-parallel
Strand 4
D
4164 4168anti-parallel
Strand 5
D
4133 4139parallel
Strand 6
D
4210 4220parallel
Strand 7
D
4242 4246parallel
Strand 8
D
4346 4351parallel
Strand 9
D
4444 4450parallel
Strand 10
D
4525 4530parallel
Strand 11
D
4534 4537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4086 4087first strand
Strand 2
D
4112 4113parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5025 5028first strand
Strand 2
E
5031 5034anti-parallel
Strand 3
E
5077 5079parallel
Back to list of sheets
Back to top of page

There are 11 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5036 5038first strand
Strand 2
E
5047 5054anti-parallel
Strand 3
E
5118 5123anti-parallel
Strand 4
E
5164 5168anti-parallel
Strand 5
E
5133 5139parallel
Strand 6
E
5210 5220parallel
Strand 7
E
5242 5246parallel
Strand 8
E
5346 5351parallel
Strand 9
E
5444 5450parallel
Strand 10
E
5525 5530parallel
Strand 11
E
5534 5537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5086 5087first strand
Strand 2
E
5112 5113parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6025 6028first strand
Strand 2
F
6031 6034anti-parallel
Strand 3
F
6077 6079parallel
Back to list of sheets
Back to top of page

There are 11 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6036 6040first strand
Strand 2
F
6043 6054anti-parallel
Strand 3
F
6118 6123anti-parallel
Strand 4
F
6164 6168anti-parallel
Strand 5
F
6133 6139parallel
Strand 6
F
6210 6220parallel
Strand 7
F
6242 6246parallel
Strand 8
F
6346 6351parallel
Strand 9
F
6444 6450parallel
Strand 10
F
6525 6530parallel
Strand 11
F
6534 6537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6086 6087first strand
Strand 2
F
6112 6113parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il