Analysis of interatomic Contacts of Structural Units in PDB entry:
1MYP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MYP entry

There are 4 chains in PDB entry 1MYP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1ALA 104
C
 ASN 114TRP 575
B
 CYS 1ALA 104
D
 ASN 114TRP 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1MYP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
61 69Right-handed alpha
Helix 2
A2
A
84 97Right-handed alpha
Helix 3
C3
C
181 187Right-handed alpha
Helix 4
C4
C
220 224Right-handed alpha
Helix 5
C5
C
244 267Right-handed alpha
Helix 6
C6
C
273 301Right-handed alpha
Helix 7
C7
C
303 309Right-handed alpha
Helix 8
C8
C
326 338Right-handed alpha
Helix 9
C9
C
368 374Right-handed alpha
Helix 10
C10
C
377 385Right-handed alpha
Helix 11
H11
C
400 405Right-handed alpha
Helix 12
H12
C
417 428Right-handed alpha
Helix 13
H13
C
433 439Right-handed alpha
Helix 14
H14
C
448 455Right-handed alpha
Helix 15
H15
C
458 467Right-handed alpha
Helix 16
H16
C
476 482Right-handed alpha
Helix 17
H17
C
493 509Right-handed alpha
Helix 18
H18
C
522 529Right-handed alpha
Helix 19
H19
C
533 540Right-handed alpha
Helix 20
B1
B
61 69Right-handed alpha
Helix 21
B2
B
84 97Right-handed alpha
Helix 22
D3
D
181 187Right-handed alpha
Helix 23
D4
D
220 224Right-handed alpha
Helix 24
D5
D
244 267Right-handed alpha
Helix 25
D6
D
273 301Right-handed alpha
Helix 26
D7
D
303 309Right-handed alpha
Helix 27
D8
D
326 338Right-handed alpha
Helix 28
D9
D
368 374Right-handed alpha
Helix 29
D10
D
377 385Right-handed alpha
Helix 30
D11
D
400 405Right-handed alpha
Helix 31
D12
D
417 428Right-handed alpha
Helix 32
D13
D
433 439Right-handed alpha
Helix 33
D14
D
448 455Right-handed alpha
Helix 34
D15
D
458 467Right-handed alpha
Helix 35
D16
D
476 482Right-handed alpha
Helix 36
D17
D
493 509Right-handed alpha
Helix 37
D18
D
522 529Right-handed alpha
Helix 38
D19
D
533 540Right-handed alpha
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There are 7 sheets in PDB entry 1MYP. Click on sheet of interest to get list of strands forming it: A, B, F, G, H, I, J,

There are 1 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
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There are 1 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 83first strand
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There are 1 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
164 165first strand
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There are 1 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
388 390first strand
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 129first strand
Strand 2
D
143 144anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
188 189first strand
Strand 2
D
196 197anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
342 344first strand
Strand 2
D
358 360anti-parallel
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