Analysis of interatomic Contacts of Structural Units in PDB entry:
1MZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MZH entry

There are 2 chains in PDB entry 1MZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 101HIS 325
B
MET 1101GLU 1321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1MZH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
103 106Right-handed 310
Helix 2
2
A
118 132Right-handed alpha
Helix 3
3
A
143 151Right-handed alpha
Helix 4
4
A
168 182Right-handed alpha
Helix 5
5
A
192 198Right-handed alpha
Helix 6
6
A
200 214Right-handed alpha
Helix 7
7
A
225 229Right-handed 310
Helix 8
8
A
230 245Right-handed alpha
Helix 9
9
A
261 273Right-handed alpha
Helix 10
10
A
286 296Right-handed alpha
Helix 11
11
A
305 320Right-handed alpha
Helix 12
12
B
1103 1106Right-handed 310
Helix 13
13
B
1118 1132Right-handed alpha
Helix 14
14
B
1143 1151Right-handed alpha
Helix 15
15
B
1168 1183Right-handed alpha
Helix 16
16
B
1192 1198Right-handed alpha
Helix 17
17
B
1200 1215Right-handed alpha
Helix 18
18
B
1225 1229Right-handed 310
Helix 19
19
B
1230 1244Right-handed alpha
Helix 20
20
B
1261 1273Right-handed alpha
Helix 21
21
B
1286 1296Right-handed alpha
Helix 22
22
B
1305 1321Right-handed alpha
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There are 2 sheets in PDB entry 1MZH. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 112first strand
Strand 2
A
136 139parallel
Strand 3
A
155 160parallel
Strand 4
A
186 190parallel
Strand 5
A
219 223parallel
Strand 6
A
248 250parallel
Strand 7
A
277 281parallel
Strand 8
A
300 303parallel
Strand 9
A
108 112parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1108 1112first strand
Strand 2
B
1136 1139parallel
Strand 3
B
1155 1160parallel
Strand 4
B
1186 1190parallel
Strand 5
B
1219 1223parallel
Strand 6
B
1248 1250parallel
Strand 7
B
1277 1281parallel
Strand 8
B
1300 1303parallel
Strand 9
B
1108 1112parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il