Analysis of interatomic Contacts of Structural Units in PDB entry:
1N0F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1N0F entry

There are 8 chains in PDB entry 1N0F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 22	MET 162
B	GLY 24	MET 162
C	MET 26	MET 162
D	MET 26	MET 162
E	MET 26	MET 162
F	MET 26	MET 162
G	MET 26	MET 162
H	MET 26	MET 162

There are 42 helices in PDB entry 1N0F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	45	51	Right-handed alpha
Helix 2	2	A	69	82	Right-handed alpha
Helix 3	3	A	87	99	Right-handed alpha
Helix 4	4	A	115	122	Right-handed alpha
Helix 5	5	A	142	151	Right-handed alpha
Helix 6	6	A	154	162	Right-handed alpha
Helix 7	7	B	45	51	Right-handed alpha
Helix 8	8	B	69	82	Right-handed alpha
Helix 9	9	B	87	99	Right-handed alpha
Helix 10	10	B	115	122	Right-handed alpha
Helix 11	11	B	142	151	Right-handed alpha
Helix 12	12	B	154	161	Right-handed alpha
Helix 13	13	C	45	51	Right-handed alpha
Helix 14	14	C	69	82	Right-handed alpha
Helix 15	15	C	87	99	Right-handed alpha
Helix 16	16	C	115	122	Right-handed alpha
Helix 17	17	C	142	151	Right-handed alpha
Helix 18	18	C	154	162	Right-handed alpha
Helix 19	19	D	45	51	Right-handed alpha
Helix 20	20	D	69	82	Right-handed alpha
Helix 21	21	D	87	99	Right-handed alpha
Helix 22	22	D	115	122	Right-handed alpha
Helix 23	23	D	142	151	Right-handed alpha
Helix 24	24	D	154	162	Right-handed alpha
Helix 25	25	E	45	51	Right-handed alpha
Helix 26	26	E	69	82	Right-handed alpha
Helix 27	27	E	87	99	Right-handed alpha
Helix 28	28	E	115	122	Right-handed alpha
Helix 29	29	E	142	151	Right-handed alpha
Helix 30	30	E	154	162	Right-handed alpha
Helix 31	31	F	45	51	Right-handed alpha
Helix 32	32	F	69	82	Right-handed alpha
Helix 33	33	F	87	99	Right-handed alpha
Helix 34	34	F	115	122	Right-handed alpha
Helix 35	35	F	142	151	Right-handed alpha
Helix 36	36	F	154	162	Right-handed alpha
Helix 37	37	G	45	51	Right-handed alpha
Helix 38	38	G	69	82	Right-handed alpha
Helix 39	39	G	87	99	Right-handed alpha
Helix 40	40	G	115	122	Right-handed alpha
Helix 41	41	G	142	151	Right-handed alpha
Helix 42	42	G	154	161	Right-handed alpha

There are 21 sheets in PDB entry 1N0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	33	first strand
Strand 2	A	128	132	anti-parallel
Strand 3	A	137	141	anti-parallel
Strand 4	A	66	67	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	111	113	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	104	105	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	33	first strand
Strand 2	B	128	132	anti-parallel
Strand 3	B	137	141	anti-parallel
Strand 4	B	66	67	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	42	first strand
Strand 2	B	111	113	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	104	105	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	33	first strand
Strand 2	C	128	132	anti-parallel
Strand 3	C	137	141	anti-parallel
Strand 4	C	66	67	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	111	113	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	104	105	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	33	first strand
Strand 2	D	128	132	anti-parallel
Strand 3	D	137	141	anti-parallel
Strand 4	D	66	67	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	111	113	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	55	first strand
Strand 2	D	104	105	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	33	first strand
Strand 2	E	128	132	anti-parallel
Strand 3	E	137	141	anti-parallel
Strand 4	E	66	67	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	42	first strand
Strand 2	E	111	113	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	55	first strand
Strand 2	E	104	105	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	33	first strand
Strand 2	F	128	132	anti-parallel
Strand 3	F	137	141	anti-parallel
Strand 4	F	66	67	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	42	first strand
Strand 2	F	111	113	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	55	first strand
Strand 2	F	104	105	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	33	first strand
Strand 2	G	128	132	anti-parallel
Strand 3	G	137	141	anti-parallel
Strand 4	G	66	67	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	40	42	first strand
Strand 2	G	111	113	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	55	first strand
Strand 2	G	104	105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1N0F

Analysis of interatomic Contacts of Structural Units in PDB entry:
1N0F