Analysis of interatomic Contacts of Structural Units in PDB entry:
1N0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1N0W entry

There are 4 chains in PDB entry 1N0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 98ASP 339
B
 PRO 1519GLN 1551
L
 THR 1SER 3
C
 GLY 1GLY 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1N0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
106 113Right-handed alpha
Helix 2
2
A
132 144Right-handed alpha
Helix 3
3
A
145 146Right-handed 310
Helix 4
4
A
147 151Right-handed 310
Helix 5
5
A
167 178Right-handed alpha
Helix 6
6
A
181 188Right-handed alpha
Helix 7
7
A
196 214Right-handed alpha
Helix 8
8
A
225 229Right-handed 310
Helix 9
9
A
237 260Right-handed alpha
Helix 10
10
B
1519 1523Right-handed 310
Helix 11
11
B
1535 1542Right-handed alpha
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There are 2 sheets in PDB entry 1N0W. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
117 118anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 335first strand
Strand 2
A
323 330anti-parallel
Strand 3
A
309 314anti-parallel
Strand 4
A
298 304anti-parallel
Strand 5
A
122 126parallel
Strand 6
A
262 267parallel
Strand 7
A
216 222parallel
Strand 8
A
156 161parallel
Strand 9
A
189 193parallel
Strand 10
B
1525 1526anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il