Analysis of interatomic Contacts of Structural Units in PDB entry:
1N58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1N58 entry

There is 1 chain in PDB entry 1N58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1N58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 62Right-handed alpha
Helix 2
2
A
79 93Right-handed alpha
Helix 3
3
A
98 102Right-handed 310
Helix 4
4
A
113 127Right-handed alpha
Helix 5
5
A
138 146Right-handed alpha
Helix 6
6
A
173 176Right-handed 310
Helix 7
7
A
182 197Right-handed alpha
Helix 8
8
A
203 218Right-handed alpha
Helix 9
9
A
223 234Right-handed alpha
Helix 10
10
A
253 264Right-handed alpha
Helix 11
11
A
265 269Right-handed 310
Helix 12
12
A
274 286Right-handed alpha
Helix 13
13
A
287 297Right-handed alpha
Helix 14
14
A
302 307Right-handed 310
Helix 15
15
A
309 322Right-handed alpha
Helix 16
16
A
338 350Right-handed alpha
Helix 17
17
A
351 356Right-handed 310
Helix 18
18
A
360 367Right-handed alpha
Helix 19
19
A
369 375Right-handed alpha
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There are 6 sheets in PDB entry 1N58. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
17 22anti-parallel
Strand 3
A
9 13anti-parallel
Strand 4
A
104 108parallel
Strand 5
A
132 137parallel
Strand 6
A
358 359anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
36 39anti-parallel
Strand 3
A
66 69anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
76 77anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 331first strand
Strand 2
A
298 301parallel
Strand 3
A
151 156parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
170 171anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 331first strand
Strand 2
A
298 301parallel
Strand 3
A
151 156parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
177 179anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
248 251anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il