Analysis of interatomic Contacts of Structural Units in PDB entry:
1N67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1N67 entry

There is 1 chain in PDB entry 1N67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 229LYS 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1N67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
232 236Right-handed 310
Helix 2
2
A
250 254Right-handed 310
Helix 3
3
A
321 326Right-handed alpha
Helix 4
4
A
440 444Right-handed 310
Helix 5
5
A
451 453Right-handed 310
Helix 6
6
A
459 462Right-handed 310
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There are 5 sheets in PDB entry 1N67. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 244first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
330 339anti-parallel
Strand 4
A
283 285anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
359 367parallel
Strand 3
A
348 356anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
315 319anti-parallel
Strand 3
A
297 299anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 375first strand
Strand 2
A
378 382anti-parallel
Strand 3
A
393 400anti-parallel
Strand 4
A
386 388anti-parallel
Strand 5
A
393 400anti-parallel
Strand 6
A
487 495anti-parallel
Strand 7
A
424 425anti-parallel
Strand 8
A
487 495anti-parallel
Strand 9
A
432 438anti-parallel
Strand 10
A
455 457anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 468first strand
Strand 2
A
471 475anti-parallel
Strand 3
A
407 416anti-parallel
Strand 4
A
482 483anti-parallel
Strand 5
A
407 416anti-parallel
Strand 6
A
503 512anti-parallel
Strand 7
A
519 527anti-parallel
Strand 8
A
539 543anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il