Analysis of interatomic Contacts of Structural Units in PDB entry:
1N82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1N82 entry

There are 2 chains in PDB entry 1N82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2VAL 331
B
 SER 1004VAL 1331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1N82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
23 30Right-handed alpha
Helix 3
3
A
30 38Right-handed alpha
Helix 4
4
A
48 53Right-handed alpha
Helix 5
5
A
61 74Right-handed alpha
Helix 6
6
A
90 95Right-handed 310
Helix 7
7
A
103 123Right-handed alpha
Helix 8
8
A
147 154Right-handed alpha
Helix 9
9
A
156 169Right-handed alpha
Helix 10
10
A
183 200Right-handed alpha
Helix 11
11
A
219 232Right-handed alpha
Helix 12
12
A
260 281Right-handed alpha
Helix 13
13
A
298 302Right-handed 310
Helix 14
14
A
322 330Right-handed alpha
Helix 15
15
B
1007 1012Right-handed alpha
Helix 16
16
B
1023 1030Right-handed alpha
Helix 17
17
B
1030 1038Right-handed alpha
Helix 18
18
B
1048 1053Right-handed alpha
Helix 19
19
B
1061 1074Right-handed alpha
Helix 20
20
B
1090 1095Right-handed 310
Helix 21
21
B
1103 1123Right-handed alpha
Helix 22
22
B
1147 1154Right-handed alpha
Helix 23
23
B
1156 1169Right-handed alpha
Helix 24
24
B
1183 1200Right-handed alpha
Helix 25
25
B
1219 1232Right-handed alpha
Helix 26
26
B
1260 1281Right-handed alpha
Helix 27
27
B
1298 1302Right-handed 310
Helix 28
28
B
1322 1330Right-handed alpha
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There are 2 sheets in PDB entry 1N82. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
236 245parallel
Strand 3
A
285 290parallel
Strand 4
A
17 22parallel
Strand 5
A
40 43parallel
Strand 6
A
77 85parallel
Strand 7
A
128 133parallel
Strand 8
A
173 178parallel
Strand 9
A
206 209parallel
Strand 10
A
236 245parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1212 1214first strand
Strand 2
B
1236 1245parallel
Strand 3
B
1285 1290parallel
Strand 4
B
1017 1022parallel
Strand 5
B
1040 1043parallel
Strand 6
B
1077 1085parallel
Strand 7
B
1128 1133parallel
Strand 8
B
1173 1178parallel
Strand 9
B
1206 1209parallel
Strand 10
B
1236 1245parallel
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