Analysis of interatomic Contacts of Structural Units in PDB entry:
1NLX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NLX entry

There are 14 chains in PDB entry 1NLX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 404VAL 507
B
ALA 604VAL 707
C
ALA 804VAL 907
D
ALA 1004VAL 1107
E
ALA 1204VAL 1307
F
ALA 1404VAL 1507
G
ALA 1604VAL 1707
H
ALA 1804VAL 1907
I
ALA 2004VAL 2107
J
ALA 2204VAL 2307
K
ALA 2404VAL 2507
L
ALA 2604VAL 2707
M
ALA 2804VAL 2907
N
ALA 3004VAL 3107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 1NLX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
404 426Right-handed alpha
Helix 2
2
A
430 457Right-handed alpha
Helix 3
3
A
459 477Right-handed alpha
Helix 4
4
A
482 500Right-handed alpha
Helix 5
5
B
604 626Right-handed alpha
Helix 6
6
B
630 657Right-handed alpha
Helix 7
7
B
659 677Right-handed alpha
Helix 8
8
B
682 700Right-handed alpha
Helix 9
9
C
805 826Right-handed alpha
Helix 10
10
C
833 857Right-handed alpha
Helix 11
11
C
859 877Right-handed alpha
Helix 12
12
C
882 900Right-handed alpha
Helix 13
13
D
1004 1026Right-handed alpha
Helix 14
14
D
1030 1057Right-handed alpha
Helix 15
15
D
1059 1077Right-handed alpha
Helix 16
16
D
1082 1100Right-handed alpha
Helix 17
17
E
1204 1226Right-handed alpha
Helix 18
18
E
1230 1257Right-handed alpha
Helix 19
19
E
1259 1277Right-handed alpha
Helix 20
20
E
1282 1300Right-handed alpha
Helix 21
21
F
1404 1426Right-handed alpha
Helix 22
22
F
1430 1457Right-handed alpha
Helix 23
23
F
1459 1477Right-handed alpha
Helix 24
24
F
1482 1500Right-handed alpha
Helix 25
25
G
1604 1626Right-handed alpha
Helix 26
26
G
1630 1657Right-handed alpha
Helix 27
27
G
1659 1677Right-handed alpha
Helix 28
28
G
1682 1700Right-handed alpha
Helix 29
29
H
1805 1826Right-handed alpha
Helix 30
30
H
1830 1857Right-handed alpha
Helix 31
31
H
1859 1877Right-handed alpha
Helix 32
32
H
1882 1900Right-handed alpha
Helix 33
33
I
2004 2026Right-handed alpha
Helix 34
34
I
2030 2057Right-handed alpha
Helix 35
35
I
2059 2077Right-handed alpha
Helix 36
36
I
2082 2100Right-handed alpha
Helix 37
37
J
2204 2226Right-handed alpha
Helix 38
38
J
2230 2257Right-handed alpha
Helix 39
39
J
2259 2277Right-handed alpha
Helix 40
40
J
2282 2300Right-handed alpha
Helix 41
41
K
2404 2426Right-handed alpha
Helix 42
42
K
2430 2457Right-handed alpha
Helix 43
43
K
2459 2477Right-handed alpha
Helix 44
44
K
2482 2500Right-handed alpha
Helix 45
45
L
2604 2626Right-handed alpha
Helix 46
46
L
2630 2657Right-handed alpha
Helix 47
47
L
2659 2677Right-handed alpha
Helix 48
48
L
2682 2700Right-handed alpha
Helix 49
49
M
2804 2826Right-handed alpha
Helix 50
50
M
2830 2857Right-handed alpha
Helix 51
51
M
2859 2877Right-handed alpha
Helix 52
52
M
2882 2900Right-handed alpha
Helix 53
53
N
3004 3026Right-handed alpha
Helix 54
54
N
3030 3057Right-handed alpha
Helix 55
55
N
3059 3077Right-handed alpha
Helix 56
56
N
3082 3100Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1NLX

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il