Analysis of interatomic Contacts of Structural Units in PDB entry:
1NLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NLZ entry

There are 6 chains in PDB entry 1NLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6LYS 328
B
 GLU 22LYS 328
C
 LEU 28ARG 330
D
 ASP 10HIS 329
E
 ALA 24LYS 328
F
 ALA 24LYS 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 55 helices in PDB entry 1NLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 42Right-handed alpha
Helix 2
2
A
73 76Right-handed 310
Helix 3
3
A
77 92Right-handed alpha
Helix 4
4
A
141 148Right-handed alpha
Helix 5
5
A
156 171Right-handed alpha
Helix 6
6
A
183 192Right-handed alpha
Helix 7
7
A
193 195Right-handed 310
Helix 8
8
A
228 238Right-handed alpha
Helix 9
9
A
252 263Right-handed alpha
Helix 10
10
A
276 290Right-handed alpha
Helix 11
13
B
25 42Right-handed alpha
Helix 12
14
B
73 76Right-handed 310
Helix 13
15
B
77 92Right-handed alpha
Helix 14
16
B
141 148Right-handed alpha
Helix 15
17
B
156 171Right-handed alpha
Helix 16
18
B
183 191Right-handed alpha
Helix 17
19
B
228 237Right-handed alpha
Helix 18
20
B
238 240Right-handed 310
Helix 19
21
B
252 263Right-handed alpha
Helix 20
22
B
276 290Right-handed alpha
Helix 21
26
C
141 149Right-handed alpha
Helix 22
27
C
156 171Right-handed alpha
Helix 23
28
C
183 191Right-handed alpha
Helix 24
29
C
228 237Right-handed alpha
Helix 25
30
C
252 263Right-handed alpha
Helix 26
31
C
276 290Right-handed alpha
Helix 27
36
D
21 42Right-handed alpha
Helix 28
37
D
73 76Right-handed 310
Helix 29
38
D
77 92Right-handed alpha
Helix 30
39
D
141 148Right-handed alpha
Helix 31
40
D
156 171Right-handed alpha
Helix 32
41
D
183 191Right-handed alpha
Helix 33
42
D
192 195Right-handed 310
Helix 34
43
D
228 237Right-handed alpha
Helix 35
44
D
252 263Right-handed alpha
Helix 36
45
D
276 290Right-handed alpha
Helix 37
48
E
25 42Right-handed alpha
Helix 38
49
E
73 76Right-handed 310
Helix 39
50
E
77 92Right-handed alpha
Helix 40
51
E
141 148Right-handed alpha
Helix 41
52
E
156 171Right-handed alpha
Helix 42
53
E
183 191Right-handed alpha
Helix 43
54
E
228 237Right-handed alpha
Helix 44
55
E
252 263Right-handed alpha
Helix 45
56
E
276 290Right-handed alpha
Helix 46
59
F
24 42Right-handed alpha
Helix 47
60
F
73 76Right-handed 310
Helix 48
61
F
77 92Right-handed alpha
Helix 49
62
F
141 148Right-handed alpha
Helix 50
63
F
156 171Right-handed alpha
Helix 51
64
F
183 192Right-handed alpha
Helix 52
65
F
193 195Right-handed 310
Helix 53
66
F
228 237Right-handed alpha
Helix 54
67
F
252 263Right-handed alpha
Helix 55
68
F
276 290Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 1NLZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
55 60anti-parallel
Strand 3
A
45 51anti-parallel
Strand 4
A
129 133anti-parallel
Strand 5
A
113 117anti-parallel
Strand 6
A
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 222first strand
Strand 2
A
201 205parallel
Strand 3
A
243 248parallel
Strand 4
A
268 273parallel
Strand 5
A
174 178parallel
Strand 6
A
312 316parallel
Strand 7
A
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 69first strand
Strand 2
B
55 60anti-parallel
Strand 3
B
45 51anti-parallel
Strand 4
B
129 133anti-parallel
Strand 5
B
113 117anti-parallel
Strand 6
B
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 222first strand
Strand 2
B
201 205parallel
Strand 3
B
243 246parallel
Strand 4
B
267 273parallel
Strand 5
B
174 178parallel
Strand 6
B
312 316parallel
Strand 7
B
322 326anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 69first strand
Strand 2
C
55 59anti-parallel
Strand 3
C
47 50anti-parallel
Strand 4
C
129 133anti-parallel
Strand 5
C
113 117anti-parallel
Strand 6
C
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
218 221first strand
Strand 2
C
201 204parallel
Strand 3
C
243 246parallel
Strand 4
C
267 273parallel
Strand 5
C
174 178parallel
Strand 6
C
312 316parallel
Strand 7
C
322 327anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 69first strand
Strand 2
D
55 60anti-parallel
Strand 3
D
45 51anti-parallel
Strand 4
D
129 133anti-parallel
Strand 5
D
113 117anti-parallel
Strand 6
D
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
218 222first strand
Strand 2
D
201 205parallel
Strand 3
D
243 246parallel
Strand 4
D
267 272parallel
Strand 5
D
174 178parallel
Strand 6
D
312 316parallel
Strand 7
D
322 327anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
65 69first strand
Strand 2
E
55 60anti-parallel
Strand 3
E
45 51anti-parallel
Strand 4
E
129 133anti-parallel
Strand 5
E
113 117anti-parallel
Strand 6
E
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
218 222first strand
Strand 2
E
201 205parallel
Strand 3
E
243 246parallel
Strand 4
E
268 272parallel
Strand 5
E
174 178parallel
Strand 6
E
312 317parallel
Strand 7
E
321 327anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
65 69first strand
Strand 2
F
55 60anti-parallel
Strand 3
F
45 51anti-parallel
Strand 4
F
129 133anti-parallel
Strand 5
F
113 117anti-parallel
Strand 6
F
103 107anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
218 222first strand
Strand 2
F
201 205parallel
Strand 3
F
243 246parallel
Strand 4
F
268 273parallel
Strand 5
F
174 178parallel
Strand 6
F
312 316parallel
Strand 7
F
322 327anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il