Analysis of interatomic Contacts of Structural Units in PDB entry:
1NMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NMU entry

There are 4 chains in PDB entry 1NMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3SER 370
B
 ALA 2ALA 105
C
 GLU 3SER 370
D
 PRO 3ALA 105
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1NMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
42 52Right-handed alpha
Helix 3
3
A
66 73Right-handed alpha
Helix 4
4
A
82 87Right-handed alpha
Helix 5
5
A
90 97Right-handed alpha
Helix 6
6
A
131 141Right-handed alpha
Helix 7
7
A
153 164Right-handed alpha
Helix 8
8
A
185 201Right-handed alpha
Helix 9
9
A
209 219Right-handed alpha
Helix 10
10
A
228 230Right-handed 310
Helix 11
11
A
231 238Right-handed alpha
Helix 12
12
A
272 283Right-handed alpha
Helix 13
13
A
286 297Right-handed alpha
Helix 14
14
A
304 312Right-handed alpha
Helix 15
15
A
314 327Right-handed alpha
Helix 16
16
A
335 353Right-handed alpha
Helix 17
17
A
356 369Right-handed alpha
Helix 18
18
B
6 21Right-handed alpha
Helix 19
19
B
26 36Right-handed alpha
Helix 20
20
B
52 63Right-handed alpha
Helix 21
21
B
78 88Right-handed alpha
Helix 22
22
B
99 105Right-handed alpha
Helix 23
23
C
16 32Right-handed alpha
Helix 24
24
C
42 52Right-handed alpha
Helix 25
25
C
66 73Right-handed alpha
Helix 26
26
C
82 87Right-handed alpha
Helix 27
27
C
90 97Right-handed alpha
Helix 28
28
C
128 130Right-handed 310
Helix 29
29
C
131 141Right-handed alpha
Helix 30
30
C
153 164Right-handed alpha
Helix 31
31
C
185 201Right-handed alpha
Helix 32
32
C
209 219Right-handed alpha
Helix 33
33
C
228 230Right-handed 310
Helix 34
34
C
231 237Right-handed alpha
Helix 35
35
C
272 283Right-handed alpha
Helix 36
36
C
286 295Right-handed alpha
Helix 37
37
C
304 312Right-handed alpha
Helix 38
38
C
314 327Right-handed alpha
Helix 39
39
C
335 353Right-handed alpha
Helix 40
40
C
356 369Right-handed alpha
Helix 41
41
D
7 21Right-handed alpha
Helix 42
42
D
26 36Right-handed alpha
Helix 43
43
D
51 63Right-handed alpha
Helix 44
44
D
73 81Right-handed alpha
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There are 12 sheets in PDB entry 1NMU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
258 266anti-parallel
Strand 4
A
59 63anti-parallel
Strand 5
A
6 10parallel
Strand 6
A
34 38parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
258 266anti-parallel
Strand 4
A
328 329parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
222 227parallel
Strand 3
A
114 118anti-parallel
Strand 4
A
242 245anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
175 182anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
90 94anti-parallel
Strand 3
B
41 46anti-parallel
Strand 4
B
67 70parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
301 302first strand
Strand 2
C
106 111anti-parallel
Strand 3
C
258 266anti-parallel
Strand 4
C
59 63anti-parallel
Strand 5
C
7 10parallel
Strand 6
C
35 38parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
301 302first strand
Strand 2
C
106 111anti-parallel
Strand 3
C
258 266anti-parallel
Strand 4
C
328 329parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 99first strand
Strand 2
C
102 103anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 147first strand
Strand 2
C
222 227parallel
Strand 3
C
114 118anti-parallel
Strand 4
C
242 245anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 171first strand
Strand 2
C
176 182anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 25first strand
Strand 2
D
90 94anti-parallel
Strand 3
D
41 44anti-parallel
Strand 4
D
66 69parallel
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