Analysis of interatomic Contacts of Structural Units in PDB entry:
1NP8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NP8 entry

There are 2 chains in PDB entry 1NP8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11PHE 159
B
 SER 511PHE 659
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1NP8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 26Right-handed alpha
Helix 2
2
A
27 29Right-handed 310
Helix 3
3
A
32 47Right-handed alpha
Helix 4
4
A
56 68Right-handed alpha
Helix 5
5
A
76 98Right-handed alpha
Helix 6
6
A
109 117Right-handed alpha
Helix 7
7
A
122 134Right-handed alpha
Helix 8
8
A
141 158Right-handed alpha
Helix 9
9
B
512 526Right-handed alpha
Helix 10
10
B
527 529Right-handed 310
Helix 11
11
B
532 547Right-handed alpha
Helix 12
12
B
556 568Right-handed alpha
Helix 13
13
B
576 598Right-handed alpha
Helix 14
14
B
609 617Right-handed alpha
Helix 15
15
B
622 629Right-handed alpha
Helix 16
16
B
630 634Right-handed 310
Helix 17
17
B
641 657Right-handed alpha
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There are no sheets in PDB entry 1NP8
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