Analysis of interatomic Contacts of Structural Units in PDB entry:
1NQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NQ6 entry

There is 1 chain in PDB entry 1NQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1NQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 10Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
26 37Right-handed alpha
Helix 4
4
A
47 52Right-handed alpha
Helix 5
5
A
60 73Right-handed alpha
Helix 6
6
A
96 115Right-handed alpha
Helix 7
7
A
140 147Right-handed alpha
Helix 8
8
A
149 162Right-handed alpha
Helix 9
9
A
178 195Right-handed alpha
Helix 10
10
A
216 226Right-handed alpha
Helix 11
11
A
241 258Right-handed alpha
Helix 12
12
A
271 275Right-handed 310
Helix 13
13
A
277 281Right-handed 310
Helix 14
14
A
292 302Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1NQ6.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 207first strand
Strand 2
A
230 238parallel
Strand 3
A
200 203parallel
Strand 4
A
166 171parallel
Strand 5
A
121 126parallel
Strand 6
A
76 84parallel
Strand 7
A
39 42parallel
Strand 8
A
14 19parallel
Strand 9
A
262 267parallel
Strand 10
A
230 238parallel
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