Analysis of interatomic Contacts of Structural Units in PDB entry:
1NSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NSJ entry

There is 1 chain in PDB entry 1NSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1NSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
40 49Right-handed alpha
Helix 3
3
A
65 75Right-handed alpha
Helix 4
4
A
88 96Right-handed alpha
Helix 5
5
A
109 118Right-handed alpha
Helix 6
6
A
141 150Right-handed 310
Helix 7
7
A
165 172Right-handed alpha
Helix 8
8
A
181 183Right-handed 310
Helix 9
9
A
192 203Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1NSJ.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
176 179parallel
Strand 3
A
154 157parallel
Strand 4
A
122 127parallel
Strand 5
A
99 106parallel
Strand 6
A
79 82parallel
Strand 7
A
55 60parallel
Strand 8
A
25 29parallel
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