Analysis of interatomic Contacts of Structural Units in PDB entry:
1NTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NTV entry

There are 2 chains in PDB entry 1NTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 23ALA 174
B
 ASN 5THR 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1NTV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 36Right-handed alpha
Helix 2
2
A
57 77Right-handed alpha
Helix 3
3
A
109 111Right-handed 310
Helix 4
4
A
147 167Right-handed alpha
Helix 5
5
A
169 174Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1NTV.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 108first strand
Strand 2
A
93 98anti-parallel
Strand 3
A
83 90anti-parallel
Strand 4
A
40 51anti-parallel
Strand 5
A
137 143anti-parallel
Strand 6
A
125 130anti-parallel
Strand 7
A
113 118anti-parallel
Strand 8
B
6 7anti-parallel
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