Analysis of interatomic Contacts of Structural Units in PDB entry:
1NTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NTY entry

There is 1 chain in PDB entry 1NTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1231THR 1535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1NTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1231 1258Right-handed alpha
Helix 2
2
A
1258 1266Right-handed alpha
Helix 3
3
A
1277 1283Right-handed alpha
Helix 4
4
A
1284 1295Right-handed alpha
Helix 5
5
A
1295 1303Right-handed alpha
Helix 6
6
A
1306 1309Right-handed 310
Helix 7
7
A
1310 1317Right-handed alpha
Helix 8
8
A
1321 1342Right-handed alpha
Helix 9
9
A
1344 1354Right-handed alpha
Helix 10
10
A
1358 1364Right-handed alpha
Helix 11
11
A
1364 1383Right-handed alpha
Helix 12
12
A
1390 1412Right-handed alpha
Helix 13
13
A
1421 1425Right-handed 310
Helix 14
14
A
1516 1534Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1NTY.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1414 1415first strand
Strand 2
A
1470 1479parallel
Strand 3
A
1456 1464anti-parallel
Strand 4
A
1445 1453anti-parallel
Strand 5
A
1427 1436anti-parallel
Strand 6
A
1510 1513anti-parallel
Strand 7
A
1495 1500anti-parallel
Strand 8
A
1483 1486anti-parallel
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