Analysis of interatomic Contacts of Structural Units in PDB entry:
1NUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NUE entry

There are 6 chains in PDB entry 1NUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 152
B
 ALA 2GLU 152
C
 ALA 2GLU 152
D
 ALA 2GLU 152
E
 ALA 2GLU 152
F
 ALA 2GLU 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 1NUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed alpha
Helix 2
2
A
21 31Right-handed alpha
Helix 3
3
A
45 51Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
61 69Right-handed alpha
Helix 6
6
A
83 91Right-handed alpha
Helix 7
7
A
96 98Right-handed 310
Helix 8
8
A
104 108Right-handed alpha
Helix 9
9
A
112 114Right-handed 310
Helix 10
10
A
123 133Right-handed alpha
Helix 11
11
A
136 138Right-handed 310
Helix 12
12
A
147 150Right-handed alpha
Helix 13
13
B
13 17Right-handed alpha
Helix 14
14
B
21 31Right-handed alpha
Helix 15
15
B
45 51Right-handed alpha
Helix 16
16
B
53 55Right-handed 310
Helix 17
17
B
61 69Right-handed alpha
Helix 18
18
B
83 91Right-handed alpha
Helix 19
19
B
96 98Right-handed 310
Helix 20
20
B
104 108Right-handed alpha
Helix 21
21
B
112 114Right-handed 310
Helix 22
22
B
123 133Right-handed alpha
Helix 23
23
B
136 138Right-handed 310
Helix 24
24
B
147 150Right-handed alpha
Helix 25
25
C
13 17Right-handed alpha
Helix 26
26
C
21 31Right-handed alpha
Helix 27
27
C
45 51Right-handed alpha
Helix 28
28
C
53 55Right-handed 310
Helix 29
29
C
59 69Right-handed 310
Helix 30
30
C
83 91Right-handed alpha
Helix 31
31
C
96 98Right-handed 310
Helix 32
32
C
104 108Right-handed alpha
Helix 33
33
C
123 133Right-handed alpha
Helix 34
34
C
136 138Right-handed 310
Helix 35
35
C
147 150Right-handed alpha
Helix 36
36
D
13 17Right-handed alpha
Helix 37
37
D
21 31Right-handed alpha
Helix 38
38
D
45 51Right-handed alpha
Helix 39
39
D
53 55Right-handed 310
Helix 40
40
D
59 68Right-handed 310
Helix 41
41
D
83 91Right-handed alpha
Helix 42
42
D
96 98Right-handed 310
Helix 43
43
D
104 108Right-handed alpha
Helix 44
44
D
123 133Right-handed alpha
Helix 45
45
D
136 138Right-handed 310
Helix 46
46
D
147 150Right-handed alpha
Helix 47
47
E
13 17Right-handed alpha
Helix 48
48
E
21 31Right-handed alpha
Helix 49
49
E
45 51Right-handed alpha
Helix 50
50
E
53 55Right-handed 310
Helix 51
51
E
61 69Right-handed alpha
Helix 52
52
E
83 91Right-handed alpha
Helix 53
53
E
96 98Right-handed 310
Helix 54
54
E
104 108Right-handed alpha
Helix 55
55
E
112 114Right-handed 310
Helix 56
56
E
123 133Right-handed alpha
Helix 57
57
E
136 138Right-handed 310
Helix 58
58
E
147 150Right-handed alpha
Helix 59
59
F
13 17Right-handed alpha
Helix 60
60
F
21 31Right-handed alpha
Helix 61
61
F
45 51Right-handed alpha
Helix 62
62
F
53 55Right-handed 310
Helix 63
63
F
61 69Right-handed alpha
Helix 64
64
F
83 91Right-handed alpha
Helix 65
65
F
96 98Right-handed 310
Helix 66
66
F
104 108Right-handed alpha
Helix 67
67
F
123 133Right-handed alpha
Helix 68
68
F
136 138Right-handed 310
Helix 69
69
F
147 150Right-handed alpha
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There are 6 sheets in PDB entry 1NUE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 119first strand
Strand 2
A
6 11anti-parallel
Strand 3
A
73 79anti-parallel
Strand 4
A
34 41anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 119first strand
Strand 2
B
6 11anti-parallel
Strand 3
B
73 79anti-parallel
Strand 4
B
34 41anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
117 119first strand
Strand 2
C
6 11anti-parallel
Strand 3
C
73 79anti-parallel
Strand 4
C
34 41anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
117 119first strand
Strand 2
D
6 11anti-parallel
Strand 3
D
73 79anti-parallel
Strand 4
D
34 41anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
117 119first strand
Strand 2
E
6 11anti-parallel
Strand 3
E
73 79anti-parallel
Strand 4
E
34 41anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
117 119first strand
Strand 2
F
6 11anti-parallel
Strand 3
F
73 79anti-parallel
Strand 4
F
34 41anti-parallel
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