Analysis of interatomic Contacts of Structural Units in PDB entry:
1NVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NVZ entry

There is 1 chain in PDB entry 1NVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1NVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 64Right-handed 310
Helix 2
2
A
82 86Right-handed 310
Helix 3
3
A
132 137Right-handed alpha
Helix 4
4
A
156 168Right-handed alpha
Helix 5
5
A
168 174Right-handed alpha
Helix 6
6
A
176 180Right-handed 310
Helix 7
7
A
193 206Right-handed alpha
Helix 8
8
A
207 209Right-handed 310
Helix 9
9
A
221 242Right-handed alpha
Helix 10
10
A
252 268Right-handed alpha
Helix 11
11
A
279 285Right-handed alpha
Helix 12
12
A
318 328Right-handed alpha
Helix 13
13
A
336 342Right-handed alpha
Helix 14
14
A
356 361Right-handed 310
Helix 15
15
A
362 383Right-handed alpha
Helix 16
16
A
393 409Right-handed alpha
Helix 17
17
A
419 433Right-handed alpha
Helix 18
18
A
434 438Right-handed 310
Helix 19
19
A
439 458Right-handed alpha
Helix 20
20
A
458 466Right-handed alpha
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There are 3 sheets in PDB entry 1NVZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 16first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
53 58anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
34 37anti-parallel
Strand 6
A
69 71anti-parallel
Strand 7
A
10 16anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
107 110anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
211 216parallel
Strand 3
A
182 188parallel
Strand 4
A
245 251parallel
Strand 5
A
302 310parallel
Strand 6
A
146 151parallel
Strand 7
A
330 333parallel
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