Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1NZS entry
Note, this PDB entry contains
modified residue(s) PHOSPHOSERINE (SEP) . This residue is
treated as heterogroup (ligand) both in the
PDB entry and in LPC/CSU analysis.
There are 5 chains in PDB entry 1NZS
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ASP 330 | ALA 333 |
A
|
VAL 337 | VAL 337 |
A
|
LYS 339 | LYS 339 |
A
|
GLU 341 | GLU 341 |
A
|
GLN 344 | ALA 348 |
Back to top of page
There is 1
helix in PDB entry 1NZS. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 340 |
346 | Right-handed alpha |
Back to top of page
There are no sheets in PDB entry
1NZS
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il