Analysis of interatomic Contacts of Structural Units in PDB entry:
1O0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O0S entry

There are 2 chains in PDB entry 1O0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2MET 603
B
 SER 2PHE 593
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 1O0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 29Right-handed alpha
Helix 2
2
A
38 44Right-handed alpha
Helix 3
3
A
50 54Right-handed 310
Helix 4
4
A
55 62Right-handed alpha
Helix 5
5
A
74 89Right-handed alpha
Helix 6
6
A
91 106Right-handed alpha
Helix 7
7
A
106 117Right-handed alpha
Helix 8
8
A
117 126Right-handed alpha
Helix 9
9
A
128 138Right-handed alpha
Helix 10
10
A
152 154Right-handed 310
Helix 11
11
A
155 164Right-handed alpha
Helix 12
12
A
188 192Right-handed 310
Helix 13
13
A
193 208Right-handed alpha
Helix 14
14
A
210 212Right-handed 310
Helix 15
15
A
225 231Right-handed alpha
Helix 16
16
A
244 263Right-handed alpha
Helix 17
17
A
274 286Right-handed alpha
Helix 18
18
A
294 315Right-handed alpha
Helix 19
19
A
317 321Right-handed 310
Helix 20
20
A
329 345Right-handed alpha
Helix 21
21
A
349 356Right-handed alpha
Helix 22
22
A
374 378Right-handed 310
Helix 23
23
A
389 398Right-handed alpha
Helix 24
24
A
413 424Right-handed alpha
Helix 25
25
A
435 439Right-handed 310
Helix 26
26
A
442 449Right-handed alpha
Helix 27
27
A
478 481Right-handed 310
Helix 28
28
A
482 494Right-handed alpha
Helix 29
29
A
499 513Right-handed alpha
Helix 30
30
A
515 520Right-handed alpha
Helix 31
31
A
527 529Right-handed 310
Helix 32
32
A
530 549Right-handed alpha
Helix 33
33
A
560 569Right-handed alpha
Helix 34
34
A
585 590Right-handed 310
Helix 35
35
B
18 29Right-handed alpha
Helix 36
36
B
38 44Right-handed alpha
Helix 37
37
B
50 54Right-handed 310
Helix 38
38
B
55 62Right-handed alpha
Helix 39
39
B
74 88Right-handed alpha
Helix 40
40
B
91 104Right-handed alpha
Helix 41
41
B
106 117Right-handed alpha
Helix 42
42
B
117 126Right-handed alpha
Helix 43
43
B
128 138Right-handed alpha
Helix 44
44
B
155 164Right-handed alpha
Helix 45
45
B
188 192Right-handed 310
Helix 46
46
B
193 208Right-handed alpha
Helix 47
47
B
210 212Right-handed 310
Helix 48
48
B
225 231Right-handed alpha
Helix 49
49
B
244 263Right-handed alpha
Helix 50
50
B
274 286Right-handed alpha
Helix 51
51
B
294 315Right-handed alpha
Helix 52
52
B
317 321Right-handed 310
Helix 53
53
B
329 345Right-handed alpha
Helix 54
54
B
349 356Right-handed alpha
Helix 55
55
B
389 398Right-handed alpha
Helix 56
56
B
413 424Right-handed alpha
Helix 57
57
B
435 439Right-handed 310
Helix 58
58
B
442 449Right-handed alpha
Helix 59
59
B
478 481Right-handed 310
Helix 60
60
B
482 493Right-handed alpha
Helix 61
61
B
499 513Right-handed alpha
Helix 62
62
B
515 521Right-handed alpha
Helix 63
63
B
527 529Right-handed 310
Helix 64
64
B
530 549Right-handed alpha
Helix 65
65
B
560 569Right-handed alpha
Helix 66
66
B
585 589Right-handed 310
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There are 6 sheets in PDB entry 1O0S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
214 220parallel
Strand 3
A
173 177parallel
Strand 4
A
267 270parallel
Strand 5
A
290 293parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
357 361anti-parallel
Strand 3
A
323 326parallel
Strand 4
A
401 404parallel
Strand 5
A
428 431parallel
Strand 6
A
455 458parallel
Strand 7
A
475 476parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 467first strand
Strand 2
A
470 472anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
214 220parallel
Strand 3
B
173 177parallel
Strand 4
B
267 270parallel
Strand 5
B
291 293parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 365first strand
Strand 2
B
357 361anti-parallel
Strand 3
B
323 326parallel
Strand 4
B
401 404parallel
Strand 5
B
428 431parallel
Strand 6
B
455 458parallel
Strand 7
B
475 476parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 467first strand
Strand 2
B
470 472anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il