Analysis of interatomic Contacts of Structural Units in PDB entry:
1O0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O0X entry

There is 1 chain in PDB entry 1O0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 6GLU 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1O0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 32Right-handed alpha
Helix 2
2
A
33 36Right-handed 310
Helix 3
3
A
41 57Right-handed alpha
Helix 4
4
A
64 68Right-handed 310
Helix 5
5
A
122 142Right-handed alpha
Helix 6
6
A
148 163Right-handed alpha
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There are 5 sheets in PDB entry 1O0X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 117first strand
Strand 2
A
96 105anti-parallel
Strand 3
A
59 60anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 117first strand
Strand 2
A
96 105anti-parallel
Strand 3
A
72 76anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
209 211anti-parallel
Strand 3
A
234 236anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
173 175anti-parallel
Strand 3
A
203 206anti-parallel
Strand 4
A
239 243anti-parallel
Strand 5
A
248 250anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 219first strand
Strand 2
A
226 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il