Analysis of interatomic Contacts of Structural Units in PDB entry:
1O58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O58 entry

There are 4 chains in PDB entry 1O58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LEU 291
B
 HIS 0LEU 291
C
 HIS 0ILE 290
D
 HIS -1LEU 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1O58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 6Right-handed alpha
Helix 2
2
A
27 29Right-handed 310
Helix 3
3
A
35 49Right-handed alpha
Helix 4
4
A
62 76Right-handed alpha
Helix 5
5
A
88 98Right-handed alpha
Helix 6
6
A
106 108Right-handed 310
Helix 7
7
A
111 126Right-handed alpha
Helix 8
8
A
135 145Right-handed alpha
Helix 9
9
A
145 154Right-handed alpha
Helix 10
10
A
168 180Right-handed alpha
Helix 11
11
A
184 186Right-handed 310
Helix 12
12
A
222 226Right-handed 310
Helix 13
13
A
233 249Right-handed alpha
Helix 14
14
A
253 269Right-handed alpha
Helix 15
15
A
283 287Right-handed 310
Helix 16
16
B
0 6Right-handed alpha
Helix 17
17
B
27 29Right-handed 310
Helix 18
18
B
35 49Right-handed alpha
Helix 19
19
B
62 76Right-handed alpha
Helix 20
20
B
89 98Right-handed alpha
Helix 21
21
B
114 126Right-handed alpha
Helix 22
22
B
135 145Right-handed alpha
Helix 23
23
B
145 154Right-handed alpha
Helix 24
24
B
168 180Right-handed alpha
Helix 25
25
B
184 186Right-handed 310
Helix 26
26
B
222 226Right-handed 310
Helix 27
27
B
233 249Right-handed alpha
Helix 28
28
B
253 269Right-handed alpha
Helix 29
29
B
283 288Right-handed 310
Helix 30
30
C
0 6Right-handed alpha
Helix 31
31
C
27 29Right-handed 310
Helix 32
32
C
35 49Right-handed alpha
Helix 33
33
C
62 76Right-handed alpha
Helix 34
34
C
88 98Right-handed alpha
Helix 35
35
C
135 145Right-handed alpha
Helix 36
36
C
145 154Right-handed alpha
Helix 37
37
C
168 180Right-handed alpha
Helix 38
38
C
184 186Right-handed 310
Helix 39
39
C
222 226Right-handed 310
Helix 40
40
C
233 249Right-handed alpha
Helix 41
41
C
253 271Right-handed alpha
Helix 42
42
C
283 287Right-handed 310
Helix 43
43
D
0 6Right-handed alpha
Helix 44
44
D
27 29Right-handed 310
Helix 45
45
D
35 49Right-handed alpha
Helix 46
46
D
62 76Right-handed alpha
Helix 47
47
D
89 98Right-handed alpha
Helix 48
48
D
118 126Right-handed alpha
Helix 49
49
D
135 145Right-handed alpha
Helix 50
50
D
145 154Right-handed alpha
Helix 51
51
D
168 180Right-handed alpha
Helix 52
52
D
184 186Right-handed 310
Helix 53
53
D
222 226Right-handed 310
Helix 54
54
D
233 249Right-handed alpha
Helix 55
55
D
253 269Right-handed alpha
Helix 56
56
D
283 287Right-handed 310
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There are 8 sheets in PDB entry 1O58. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
21 25anti-parallel
Strand 3
A
276 280parallel
Strand 4
A
160 164parallel
Strand 5
A
187 193parallel
Strand 6
A
228 232parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
79 84parallel
Strand 3
A
101 105parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
21 25anti-parallel
Strand 3
B
276 280parallel
Strand 4
B
160 164parallel
Strand 5
B
187 193parallel
Strand 6
B
228 232parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
79 84parallel
Strand 3
B
101 105parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 13first strand
Strand 2
C
21 25anti-parallel
Strand 3
C
276 280parallel
Strand 4
C
160 164parallel
Strand 5
C
187 193parallel
Strand 6
C
228 232parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 59first strand
Strand 2
C
79 82parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 13first strand
Strand 2
D
21 25anti-parallel
Strand 3
D
276 280parallel
Strand 4
D
160 164parallel
Strand 5
D
187 193parallel
Strand 6
D
228 232parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 59first strand
Strand 2
D
79 82parallel
Strand 3
D
101 103parallel
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