Analysis of interatomic Contacts of Structural Units in PDB entry:
1O5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O5Z entry

There is 1 chain in PDB entry 1O5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2LEU 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1O5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 12Right-handed alpha
Helix 2
2
A
23 33Right-handed alpha
Helix 3
3
A
35 39Right-handed 310
Helix 4
4
A
50 66Right-handed alpha
Helix 5
5
A
79 82Right-handed 310
Helix 6
6
A
92 111Right-handed alpha
Helix 7
7
A
119 135Right-handed alpha
Helix 8
8
A
151 156Right-handed 310
Helix 9
9
A
177 186Right-handed alpha
Helix 10
10
A
187 189Right-handed 310
Helix 11
11
A
201 216Right-handed alpha
Helix 12
12
A
258 275Right-handed alpha
Helix 13
13
A
279 290Right-handed alpha
Helix 14
14
A
313 328Right-handed alpha
Helix 15
15
A
344 350Right-handed alpha
Helix 16
16
A
351 353Right-handed 310
Helix 17
17
A
371 383Right-handed alpha
Helix 18
18
A
391 398Right-handed alpha
Helix 19
19
A
408 422Right-handed alpha
Helix 20
20
A
425 430Right-handed 310
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There are 3 sheets in PDB entry 1O5Z. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
84 86anti-parallel
Strand 3
A
69 72anti-parallel
Strand 4
A
139 143parallel
Strand 5
A
41 46parallel
Strand 6
A
161 163parallel
Strand 7
A
195 197parallel
Strand 8
A
219 221parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 232first strand
Strand 2
A
238 243anti-parallel
Strand 3
A
247 253anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 301first strand
Strand 2
A
304 308anti-parallel
Strand 3
A
402 406parallel
Strand 4
A
333 337parallel
Strand 5
A
358 361parallel
Strand 6
A
387 388parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il