Analysis of interatomic Contacts of Structural Units in PDB entry:
1O70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O70 entry

There is 1 chain in PDB entry 1O70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 328VAL 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1O70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
329 343Right-handed alpha
Helix 2
2
A
345 353Right-handed alpha
Helix 3
3
A
363 370Right-handed alpha
Helix 4
4
A
372 377Right-handed alpha
Helix 5
5
A
378 389Right-handed alpha
Helix 6
6
A
396 404Right-handed alpha
Helix 7
7
A
427 431Right-handed 310
Helix 8
8
A
469 477Right-handed alpha
Helix 9
9
A
480 487Right-handed alpha
Helix 10
10
A
493 498Right-handed 310
Helix 11
11
A
509 520Right-handed alpha
Helix 12
12
A
520 528Right-handed alpha
Helix 13
13
A
529 531Right-handed 310
Helix 14
14
A
532 542Right-handed alpha
Helix 15
15
A
552 563Right-handed alpha
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There are 2 sheets in PDB entry 1O70. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
357 362anti-parallel
Strand 3
A
454 459parallel
Strand 4
A
440 450anti-parallel
Strand 5
A
432 437anti-parallel
Strand 6
A
419 425anti-parallel
Strand 7
A
411 412anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 547first strand
Strand 2
A
502 508anti-parallel
Strand 3
A
607 612parallel
Strand 4
A
593 604anti-parallel
Strand 5
A
585 590anti-parallel
Strand 6
A
574 582anti-parallel
Strand 7
A
566 569anti-parallel
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