Analysis of interatomic Contacts of Structural Units in PDB entry:
1O77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O77 entry

There are 5 chains in PDB entry 1O77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 639SER 784
B
 ILE 639SER 784
C
 ILE 639SER 784
D
 ILE 639SER 784
E
 ILE 639SER 784
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 1O77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
651 658Right-handed alpha
Helix 2
2
A
658 665Right-handed alpha
Helix 3
3
A
676 678Right-handed 310
Helix 4
4
A
684 695Right-handed alpha
Helix 5
5
A
704 711Right-handed alpha
Helix 6
6
A
711 717Right-handed alpha
Helix 7
7
A
719 723Right-handed 310
Helix 8
8
A
741 745Right-handed 310
Helix 9
9
A
749 759Right-handed alpha
Helix 10
10
A
767 783Right-handed alpha
Helix 11
11
B
651 657Right-handed alpha
Helix 12
12
B
657 665Right-handed alpha
Helix 13
13
B
675 679Right-handed alpha
Helix 14
14
B
688 694Right-handed alpha
Helix 15
15
B
704 711Right-handed alpha
Helix 16
16
B
711 717Right-handed alpha
Helix 17
17
B
749 758Right-handed alpha
Helix 18
18
B
767 769Right-handed 310
Helix 19
19
B
770 783Right-handed alpha
Helix 20
20
C
648 650Right-handed 310
Helix 21
21
C
651 656Right-handed alpha
Helix 22
22
C
657 663Right-handed alpha
Helix 23
23
C
675 679Right-handed alpha
Helix 24
24
C
689 694Right-handed alpha
Helix 25
25
C
704 711Right-handed alpha
Helix 26
26
C
711 717Right-handed alpha
Helix 27
27
C
749 758Right-handed alpha
Helix 28
28
C
767 784Right-handed alpha
Helix 29
29
D
652 665Right-handed alpha
Helix 30
30
D
675 679Right-handed alpha
Helix 31
31
D
684 694Right-handed alpha
Helix 32
32
D
704 712Right-handed alpha
Helix 33
33
D
712 717Right-handed alpha
Helix 34
34
D
749 758Right-handed alpha
Helix 35
35
D
773 783Right-handed alpha
Helix 36
36
E
648 650Right-handed 310
Helix 37
37
E
651 657Right-handed alpha
Helix 38
38
E
657 665Right-handed alpha
Helix 39
39
E
675 679Right-handed alpha
Helix 40
40
E
684 695Right-handed alpha
Helix 41
41
E
705 711Right-handed alpha
Helix 42
42
E
712 717Right-handed 310
Helix 43
43
E
749 759Right-handed alpha
Helix 44
44
E
770 783Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 1O77. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, DB, EA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 674first strand
Strand 2
A
641 646parallel
Strand 3
A
696 703parallel
Strand 4
A
732 736parallel
Strand 5
A
762 763parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
672 674first strand
Strand 2
B
643 646parallel
Strand 3
B
699 703parallel
Strand 4
B
732 736parallel
Strand 5
B
761 763parallel
Back to list of sheets
Back to top of page

There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
672 674first strand
Strand 2
C
643 646parallel
Strand 3
C
699 701parallel
Strand 4
C
732 736parallel
Strand 5
C
761 763parallel
Back to list of sheets
Back to top of page

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
672 674first strand
Strand 2
D
641 646parallel
Strand 3
D
696 701parallel
Strand 4
D
732 733parallel
Back to list of sheets
Back to top of page

There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
735 736first strand
Strand 2
D
762 763parallel
Back to list of sheets
Back to top of page

There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
672 674first strand
Strand 2
E
641 646parallel
Strand 3
E
696 703parallel
Strand 4
E
732 736parallel
Strand 5
E
762 763parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il