Analysis of interatomic Contacts of Structural Units in PDB entry:
1O7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O7X entry

There are 4 chains in PDB entry 1O7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3GLN 369
B
 VAL 3TYR 368
C
 VAL 3VAL 372
D
 VAL 3GLU 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 1O7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 9Right-handed 310
Helix 2
2
A
35 42Right-handed alpha
Helix 3
3
A
43 54Right-handed alpha
Helix 4
4
A
58 71Right-handed alpha
Helix 5
5
A
76 86Right-handed alpha
Helix 6
6
A
91 107Right-handed alpha
Helix 7
7
A
115 139Right-handed alpha
Helix 8
8
A
151 162Right-handed alpha
Helix 9
9
A
166 181Right-handed alpha
Helix 10
10
A
186 198Right-handed alpha
Helix 11
11
A
201 214Right-handed alpha
Helix 12
12
A
220 233Right-handed alpha
Helix 13
13
A
234 236Right-handed 310
Helix 14
14
A
237 246Right-handed alpha
Helix 15
15
A
265 280Right-handed alpha
Helix 16
16
A
282 304Right-handed alpha
Helix 17
17
A
315 324Right-handed alpha
Helix 18
18
A
326 328Right-handed 310
Helix 19
19
A
329 353Right-handed alpha
Helix 20
20
B
5 9Right-handed 310
Helix 21
21
B
35 42Right-handed alpha
Helix 22
22
B
43 54Right-handed alpha
Helix 23
23
B
58 73Right-handed alpha
Helix 24
24
B
76 86Right-handed alpha
Helix 25
25
B
91 107Right-handed alpha
Helix 26
26
B
115 139Right-handed alpha
Helix 27
27
B
151 162Right-handed alpha
Helix 28
28
B
166 180Right-handed alpha
Helix 29
29
B
186 198Right-handed alpha
Helix 30
30
B
201 214Right-handed alpha
Helix 31
31
B
220 233Right-handed alpha
Helix 32
32
B
234 236Right-handed 310
Helix 33
33
B
237 246Right-handed alpha
Helix 34
34
B
265 279Right-handed alpha
Helix 35
35
B
282 304Right-handed alpha
Helix 36
36
B
305 307Right-handed 310
Helix 37
37
B
315 323Right-handed alpha
Helix 38
38
B
326 328Right-handed 310
Helix 39
39
B
329 353Right-handed alpha
Helix 40
40
C
5 9Right-handed 310
Helix 41
41
C
35 42Right-handed alpha
Helix 42
42
C
43 54Right-handed alpha
Helix 43
43
C
58 72Right-handed alpha
Helix 44
44
C
76 86Right-handed alpha
Helix 45
45
C
91 107Right-handed alpha
Helix 46
46
C
115 140Right-handed alpha
Helix 47
47
C
151 162Right-handed alpha
Helix 48
48
C
166 181Right-handed alpha
Helix 49
49
C
186 198Right-handed alpha
Helix 50
50
C
201 214Right-handed alpha
Helix 51
51
C
220 233Right-handed alpha
Helix 52
52
C
234 236Right-handed 310
Helix 53
53
C
237 246Right-handed alpha
Helix 54
54
C
265 277Right-handed alpha
Helix 55
55
C
282 304Right-handed alpha
Helix 56
56
C
305 307Right-handed 310
Helix 57
57
C
315 323Right-handed alpha
Helix 58
58
C
326 328Right-handed 310
Helix 59
59
C
329 353Right-handed alpha
Helix 60
60
D
5 9Right-handed 310
Helix 61
61
D
35 42Right-handed alpha
Helix 62
62
D
43 54Right-handed alpha
Helix 63
63
D
58 71Right-handed alpha
Helix 64
64
D
76 86Right-handed alpha
Helix 65
65
D
91 107Right-handed alpha
Helix 66
66
D
115 139Right-handed alpha
Helix 67
67
D
151 162Right-handed alpha
Helix 68
68
D
166 180Right-handed alpha
Helix 69
69
D
186 198Right-handed alpha
Helix 70
70
D
201 214Right-handed alpha
Helix 71
71
D
220 233Right-handed alpha
Helix 72
72
D
237 246Right-handed alpha
Helix 73
73
D
265 279Right-handed alpha
Helix 74
74
D
282 304Right-handed alpha
Helix 75
75
D
315 323Right-handed alpha
Helix 76
76
D
326 328Right-handed 310
Helix 77
77
D
329 353Right-handed alpha
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There are 8 sheets in PDB entry 1O7X. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, CA, CB, CC, A,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 16first strand
Strand 2
B
360 363parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
27 30anti-parallel
Strand 3
A
33 34anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
B
12 16parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
27 30anti-parallel
Strand 3
B
33 34anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
D
360 363parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 22first strand
Strand 2
C
27 30anti-parallel
Strand 3
C
33 34anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
360 363first strand
Strand 2
D
12 16parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 22first strand
Strand 2
D
27 30anti-parallel
Strand 3
D
33 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il