Analysis of interatomic Contacts of Structural Units in PDB entry:
1O96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O96 entry

There are 8 chains in PDB entry 1O96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 262
B
 SER 1LEU 318
C
 MET 1PHE 261
D
 SER 1LEU 318
E
 MET 1PHE 261
F
 SER 1LEU 318
Q
 MET 1PHE 261
Z
 SER 1LEU 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 1O96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 53Right-handed alpha
Helix 2
2
A
66 68Right-handed 310
Helix 3
3
A
69 79Right-handed alpha
Helix 4
4
A
89 93Right-handed 310
Helix 5
5
A
96 112Right-handed alpha
Helix 6
6
A
129 139Right-handed alpha
Helix 7
7
A
165 167Right-handed 310
Helix 8
8
A
193 200Right-handed alpha
Helix 9
9
A
210 214Right-handed 310
Helix 10
10
A
216 220Right-handed 310
Helix 11
11
A
221 225Right-handed 310
Helix 12
12
A
246 262Right-handed alpha
Helix 13
13
B
16 29Right-handed alpha
Helix 14
14
B
44 47Right-handed 310
Helix 15
15
B
48 53Right-handed alpha
Helix 16
16
B
71 87Right-handed alpha
Helix 17
17
B
98 101Right-handed 310
Helix 18
18
B
102 110Right-handed alpha
Helix 19
19
B
210 213Right-handed 310
Helix 20
20
B
214 216Right-handed 310
Helix 21
21
B
217 229Right-handed alpha
Helix 22
22
B
235 241Right-handed alpha
Helix 23
23
B
245 248Right-handed 310
Helix 24
24
B
271 276Right-handed alpha
Helix 25
25
B
293 298Right-handed 310
Helix 26
26
B
306 318Right-handed alpha
Helix 27
27
C
27 29Right-handed 310
Helix 28
28
C
36 53Right-handed alpha
Helix 29
29
C
66 68Right-handed 310
Helix 30
30
C
69 78Right-handed alpha
Helix 31
31
C
89 93Right-handed 310
Helix 32
32
C
96 112Right-handed alpha
Helix 33
33
C
129 139Right-handed alpha
Helix 34
34
C
193 203Right-handed alpha
Helix 35
35
C
216 220Right-handed 310
Helix 36
36
C
221 225Right-handed 310
Helix 37
37
C
246 261Right-handed alpha
Helix 38
38
D
16 29Right-handed alpha
Helix 39
39
D
44 49Right-handed 310
Helix 40
40
D
49 53Right-handed 310
Helix 41
41
D
71 87Right-handed alpha
Helix 42
42
D
98 101Right-handed 310
Helix 43
43
D
102 110Right-handed alpha
Helix 44
44
D
210 213Right-handed 310
Helix 45
45
D
214 216Right-handed 310
Helix 46
46
D
217 229Right-handed alpha
Helix 47
47
D
235 240Right-handed alpha
Helix 48
48
D
245 248Right-handed 310
Helix 49
49
D
271 277Right-handed alpha
Helix 50
50
D
293 298Right-handed 310
Helix 51
51
D
306 318Right-handed alpha
Helix 52
52
E
27 29Right-handed 310
Helix 53
53
E
36 53Right-handed alpha
Helix 54
54
E
66 68Right-handed 310
Helix 55
55
E
69 79Right-handed alpha
Helix 56
56
E
89 93Right-handed 310
Helix 57
57
E
96 112Right-handed alpha
Helix 58
58
E
129 139Right-handed alpha
Helix 59
59
E
165 167Right-handed 310
Helix 60
60
E
193 203Right-handed alpha
Helix 61
61
E
210 214Right-handed 310
Helix 62
62
E
216 220Right-handed 310
Helix 63
63
E
246 261Right-handed alpha
Helix 64
64
F
16 29Right-handed alpha
Helix 65
65
F
44 49Right-handed 310
Helix 66
66
F
71 87Right-handed alpha
Helix 67
67
F
98 101Right-handed 310
Helix 68
68
F
102 110Right-handed alpha
Helix 69
69
F
210 213Right-handed 310
Helix 70
70
F
214 216Right-handed 310
Helix 71
71
F
217 229Right-handed alpha
Helix 72
72
F
235 242Right-handed alpha
Helix 73
73
F
245 248Right-handed 310
Helix 74
74
F
271 276Right-handed alpha
Helix 75
75
F
293 299Right-handed 310
Helix 76
76
F
306 316Right-handed alpha
Helix 77
77
Q
27 29Right-handed 310
Helix 78
78
Q
36 53Right-handed alpha
Helix 79
79
Q
66 68Right-handed 310
Helix 80
80
Q
69 79Right-handed alpha
Helix 81
81
Q
89 93Right-handed 310
Helix 82
82
Q
96 112Right-handed alpha
Helix 83
83
Q
129 139Right-handed alpha
Helix 84
84
Q
216 220Right-handed 310
Helix 85
85
Q
246 260Right-handed alpha
Helix 86
86
Z
16 29Right-handed alpha
Helix 87
87
Z
45 47Right-handed 310
Helix 88
88
Z
48 53Right-handed alpha
Helix 89
89
Z
71 87Right-handed alpha
Helix 90
90
Z
96 101Right-handed alpha
Helix 91
91
Z
102 110Right-handed alpha
Helix 92
92
Z
210 213Right-handed 310
Helix 93
93
Z
214 216Right-handed 310
Helix 94
94
Z
217 229Right-handed alpha
Helix 95
95
Z
235 241Right-handed alpha
Helix 96
96
Z
245 248Right-handed 310
Helix 97
97
Z
271 279Right-handed alpha
Helix 98
98
Z
293 298Right-handed 310
Helix 99
99
Z
306 318Right-handed alpha
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There are 22 sheets in PDB entry 1O96. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, EA, EB, FA, FB, FC, QA, QB, QC, QD, ZA, ZB,

There are 16 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
83 87parallel
Strand 3
A
58 64parallel
Strand 4
A
2 6parallel
Strand 5
A
115 119parallel
Strand 6
A
179 182parallel
Strand 7
A
142 150parallel
Strand 8
A
157 163anti-parallel
Strand 9
A
169 175anti-parallel
Strand 10
B
183 190anti-parallel
Strand 11
C
241 243parallel
Strand 12
D
301 303parallel
Strand 13
D
284 287parallel
Strand 14
D
262 266parallel
Strand 15
D
204 208parallel
Strand 16
D
231 234parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
31 35anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 233first strand
Strand 2
B
139 144anti-parallel
Strand 3
B
127 134anti-parallel
Strand 4
B
120 124anti-parallel
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There are 16 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
204 208parallel
Strand 3
B
262 266parallel
Strand 4
B
283 287parallel
Strand 5
B
301 303parallel
Strand 6
A
241 243parallel
Strand 7
F
183 189parallel
Strand 8
E
169 175anti-parallel
Strand 9
E
157 163anti-parallel
Strand 10
E
142 150anti-parallel
Strand 11
E
179 182parallel
Strand 12
E
115 119parallel
Strand 13
E
2 6parallel
Strand 14
E
58 64parallel
Strand 15
E
83 87parallel
Strand 16
E
205 208parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 118first strand
Strand 2
B
151 155parallel
Strand 3
B
90 94parallel
Strand 4
B
2 6parallel
Strand 5
B
35 41parallel
Strand 6
B
59 64parallel
Strand 7
B
170 175parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 10first strand
Strand 2
B
13 14anti-parallel
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There are 10 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 208first strand
Strand 2
C
83 87parallel
Strand 3
C
58 64parallel
Strand 4
C
2 6parallel
Strand 5
C
115 119parallel
Strand 6
C
179 182parallel
Strand 7
C
142 150parallel
Strand 8
C
157 163anti-parallel
Strand 9
C
169 175anti-parallel
Strand 10
D
183 189anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
31 35anti-parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
228 233first strand
Strand 2
D
139 144anti-parallel
Strand 3
D
127 134anti-parallel
Strand 4
D
120 124anti-parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 118first strand
Strand 2
D
151 155parallel
Strand 3
D
90 94parallel
Strand 4
D
2 6parallel
Strand 5
D
35 41parallel
Strand 6
D
59 64parallel
Strand 7
D
170 175parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 10first strand
Strand 2
D
13 14anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 13first strand
Strand 2
E
31 35anti-parallel
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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
228 233first strand
Strand 2
F
139 144anti-parallel
Strand 3
F
127 134anti-parallel
Strand 4
F
120 124anti-parallel
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There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
113 118first strand
Strand 2
F
151 155parallel
Strand 3
F
90 94parallel
Strand 4
F
2 6parallel
Strand 5
F
35 41parallel
Strand 6
F
59 64parallel
Strand 7
F
170 175parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
9 10first strand
Strand 2
F
13 14anti-parallel
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There are 5 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
231 234first strand
Strand 2
F
204 208parallel
Strand 3
F
262 266parallel
Strand 4
F
283 287parallel
Strand 5
F
301 303parallel
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There are 10 strands in QA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
206 208first strand
Strand 2
Q
83 87parallel
Strand 3
Q
58 63parallel
Strand 4
Q
2 6parallel
Strand 5
Q
115 119parallel
Strand 6
Q
178 182parallel
Strand 7
Q
142 150parallel
Strand 8
Q
157 163anti-parallel
Strand 9
Q
169 175anti-parallel
Strand 10
Z
183 189anti-parallel
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There are 2 strands in QB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
9 13first strand
Strand 2
Q
31 35anti-parallel
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There are 4 strands in QC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
228 233first strand
Strand 2
Z
139 144anti-parallel
Strand 3
Z
127 134anti-parallel
Strand 4
Z
120 124anti-parallel
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There are 6 strands in QD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
241 242first strand
Strand 2
Z
301 303parallel
Strand 3
Z
283 287parallel
Strand 4
Z
262 266parallel
Strand 5
Z
204 208parallel
Strand 6
Z
231 234parallel
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There are 7 strands in ZA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
113 118first strand
Strand 2
Z
151 155parallel
Strand 3
Z
90 94parallel
Strand 4
Z
2 6parallel
Strand 5
Z
35 41parallel
Strand 6
Z
59 64parallel
Strand 7
Z
170 175parallel
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There are 2 strands in ZB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
9 10first strand
Strand 2
Z
13 14anti-parallel
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