Analysis of interatomic Contacts of Structural Units in PDB entry:
1OAH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OAH entry

There are 2 chains in PDB entry 1OAH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 38ALA 519
B
 THR 38ALA 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1OAH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 51Right-handed 310
Helix 2
2
A
54 63Right-handed alpha
Helix 3
3
A
64 66Right-handed 310
Helix 4
4
A
98 103Right-handed alpha
Helix 5
5
A
106 110Right-handed 310
Helix 6
6
A
117 119Right-handed 310
Helix 7
7
A
120 128Right-handed alpha
Helix 8
8
A
144 148Right-handed 310
Helix 9
9
A
153 162Right-handed alpha
Helix 10
10
A
163 165Right-handed 310
Helix 11
11
A
170 174Right-handed 310
Helix 12
12
A
187 191Right-handed 310
Helix 13
13
A
203 213Right-handed alpha
Helix 14
14
A
216 220Right-handed 310
Helix 15
15
A
221 232Right-handed alpha
Helix 16
16
A
259 267Right-handed alpha
Helix 17
17
A
300 306Right-handed alpha
Helix 18
18
A
310 314Right-handed 310
Helix 19
19
A
316 322Right-handed alpha
Helix 20
20
A
339 343Right-handed 310
Helix 21
21
A
357 396Right-handed alpha
Helix 22
22
A
403 427Right-handed alpha
Helix 23
23
A
435 461Right-handed alpha
Helix 24
24
A
466 470Right-handed 310
Helix 25
25
A
472 477Right-handed alpha
Helix 26
26
A
486 489Right-handed 310
Helix 27
27
A
490 495Right-handed alpha
Helix 28
28
A
499 503Right-handed 310
Helix 29
29
B
47 52Right-handed alpha
Helix 30
30
B
54 63Right-handed alpha
Helix 31
31
B
64 66Right-handed 310
Helix 32
32
B
98 103Right-handed alpha
Helix 33
33
B
106 110Right-handed 310
Helix 34
34
B
117 119Right-handed 310
Helix 35
35
B
120 128Right-handed alpha
Helix 36
36
B
144 148Right-handed 310
Helix 37
37
B
153 162Right-handed alpha
Helix 38
38
B
163 165Right-handed 310
Helix 39
39
B
170 174Right-handed 310
Helix 40
40
B
187 191Right-handed 310
Helix 41
41
B
203 213Right-handed alpha
Helix 42
42
B
216 220Right-handed 310
Helix 43
43
B
221 232Right-handed alpha
Helix 44
44
B
259 267Right-handed alpha
Helix 45
45
B
300 306Right-handed alpha
Helix 46
46
B
310 314Right-handed 310
Helix 47
47
B
316 322Right-handed alpha
Helix 48
48
B
339 343Right-handed 310
Helix 49
49
B
357 396Right-handed alpha
Helix 50
50
B
403 427Right-handed alpha
Helix 51
51
B
435 461Right-handed alpha
Helix 52
52
B
465 470Right-handed alpha
Helix 53
53
B
472 477Right-handed alpha
Helix 54
54
B
486 489Right-handed 310
Helix 55
55
B
490 495Right-handed alpha
Helix 56
56
B
499 503Right-handed 310
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There are 9 sheets in PDB entry 1OAH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, BE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
250 251anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
279 281anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
293 294anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 514first strand
Strand 2
A
517 518anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
250 251anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 273first strand
Strand 2
B
279 281anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 286first strand
Strand 2
B
293 294anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
331 333anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
513 514first strand
Strand 2
B
517 518anti-parallel
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