Analysis of interatomic Contacts of Structural Units in PDB entry:
1OAR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OAR entry

There are 8 chains in PDB entry 1OAR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 GLU 1ALA 122
I
 PRO 14LEU 116
J
 GLU 1ALA 122
K
 PRO 14LEU 116
L
 ALA 2LEU 109
M
 VAL 3LEU 109
N
 ALA 2LEU 109
O
 VAL 3LEU 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1OAR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
H
28 32Right-handed 310
Helix 2
2
H
62 65Right-handed 310
Helix 3
3
H
87 91Right-handed 310
Helix 4
4
J
28 32Right-handed 310
Helix 5
5
J
62 65Right-handed 310
Helix 6
6
J
87 91Right-handed 310
Helix 7
7
L
30 34Right-handed 310
Helix 8
8
L
81 85Right-handed 310
Helix 9
9
M
30 34Right-handed 310
Helix 10
10
M
81 85Right-handed 310
Helix 11
11
N
30 34Right-handed 310
Helix 12
12
N
81 85Right-handed 310
Helix 13
13
O
30 34Right-handed 310
Helix 14
14
O
81 85Right-handed 310
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There are 32 sheets in PDB entry 1OAR. Click on sheet of interest to get list of strands forming it: HA, HB, HC, HD, IA, IB, IC, ID, JA, JB, JC, JD, KA, KB, KC, KD, LA, LB, LC, LD, MA, MB, MC, MD, NA, NB, NC, ND, OA, OB, OC, OD,

There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 4 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118anti-parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
106 110anti-parallel
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There are 6 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118anti-parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 2 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
106 110first strand
Strand 2
H
92 100anti-parallel
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There are 3 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
18 23first strand
Strand 2
I
78 83anti-parallel
Strand 3
I
68 71anti-parallel
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There are 5 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
58 60first strand
Strand 2
I
46 51anti-parallel
Strand 3
I
33 39anti-parallel
Strand 4
I
93 100anti-parallel
Strand 5
I
106 110anti-parallel
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There are 5 strands in IC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
58 60first strand
Strand 2
I
46 51anti-parallel
Strand 3
I
33 39anti-parallel
Strand 4
I
93 100anti-parallel
Strand 5
I
114 115anti-parallel
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There are 2 strands in ID sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
106 110first strand
Strand 2
I
93 100anti-parallel
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There are 4 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
18 25anti-parallel
Strand 3
J
78 83anti-parallel
Strand 4
J
68 73anti-parallel
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There are 4 strands in JB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
114 118anti-parallel
Strand 3
J
92 100anti-parallel
Strand 4
J
106 110anti-parallel
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There are 6 strands in JC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
114 118anti-parallel
Strand 3
J
92 100anti-parallel
Strand 4
J
33 39anti-parallel
Strand 5
J
45 52anti-parallel
Strand 6
J
57 60anti-parallel
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There are 2 strands in JD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
106 110first strand
Strand 2
J
92 100anti-parallel
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There are 3 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
18 22first strand
Strand 2
K
79 83anti-parallel
Strand 3
K
68 71anti-parallel
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There are 5 strands in KB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
58 60first strand
Strand 2
K
46 51anti-parallel
Strand 3
K
33 39anti-parallel
Strand 4
K
93 100anti-parallel
Strand 5
K
106 110anti-parallel
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There are 5 strands in KC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
58 60first strand
Strand 2
K
46 51anti-parallel
Strand 3
K
33 39anti-parallel
Strand 4
K
93 100anti-parallel
Strand 5
K
114 115anti-parallel
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There are 2 strands in KD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
106 110first strand
Strand 2
K
93 100anti-parallel
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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 6first strand
Strand 2
L
17 24anti-parallel
Strand 3
L
72 78anti-parallel
Strand 4
L
64 69anti-parallel
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There are 4 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
104 108parallel
Strand 3
L
86 94anti-parallel
Strand 4
L
97 100anti-parallel
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There are 6 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
104 108parallel
Strand 3
L
86 94anti-parallel
Strand 4
L
36 41anti-parallel
Strand 5
L
45 51anti-parallel
Strand 6
L
55 56anti-parallel
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There are 2 strands in LD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
97 100first strand
Strand 2
L
86 94anti-parallel
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There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
5 6first strand
Strand 2
M
17 23anti-parallel
Strand 3
M
72 78anti-parallel
Strand 4
M
64 69anti-parallel
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There are 4 strands in MB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
9 12first strand
Strand 2
M
104 108parallel
Strand 3
M
86 94anti-parallel
Strand 4
M
97 100anti-parallel
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There are 6 strands in MC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
9 12first strand
Strand 2
M
104 108parallel
Strand 3
M
86 94anti-parallel
Strand 4
M
36 41anti-parallel
Strand 5
M
45 51anti-parallel
Strand 6
M
55 56anti-parallel
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There are 2 strands in MD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
97 100first strand
Strand 2
M
86 94anti-parallel
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There are 4 strands in NA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
4 6first strand
Strand 2
N
17 24anti-parallel
Strand 3
N
72 78anti-parallel
Strand 4
N
64 69anti-parallel
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There are 4 strands in NB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
9 12first strand
Strand 2
N
104 108parallel
Strand 3
N
86 94anti-parallel
Strand 4
N
97 100anti-parallel
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There are 6 strands in NC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
9 12first strand
Strand 2
N
104 108parallel
Strand 3
N
86 94anti-parallel
Strand 4
N
36 41anti-parallel
Strand 5
N
45 51anti-parallel
Strand 6
N
55 56anti-parallel
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There are 2 strands in ND sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
97 100first strand
Strand 2
N
86 94anti-parallel
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There are 4 strands in OA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
4 6first strand
Strand 2
O
17 24anti-parallel
Strand 3
O
72 78anti-parallel
Strand 4
O
64 69anti-parallel
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There are 4 strands in OB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
9 12first strand
Strand 2
O
104 108parallel
Strand 3
O
86 94anti-parallel
Strand 4
O
97 100anti-parallel
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There are 6 strands in OC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
9 12first strand
Strand 2
O
104 108parallel
Strand 3
O
86 94anti-parallel
Strand 4
O
36 41anti-parallel
Strand 5
O
45 51anti-parallel
Strand 6
O
55 56anti-parallel
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There are 2 strands in OD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
97 100first strand
Strand 2
O
86 94anti-parallel
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