Analysis of interatomic Contacts of Structural Units in PDB entry:
1OAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OAZ entry

There are 6 chains in PDB entry 1OAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ALA 122
B
 SER 1ALA 122
H
 GLU 1ALA 122
J
 GLU 1ALA 122
L
 ALA 2LEU 109
N
 ALA 2LEU 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1OAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
52 57Right-handed alpha
Helix 3
3
A
80 85Right-handed 310
Helix 4
4
A
109 118Right-handed alpha
Helix 5
5
B
11 16Right-handed alpha
Helix 6
6
B
52 57Right-handed alpha
Helix 7
7
B
80 85Right-handed 310
Helix 8
8
B
109 118Right-handed alpha
Helix 9
9
H
28 32Right-handed 310
Helix 10
10
H
62 65Right-handed 310
Helix 11
11
H
87 91Right-handed 310
Helix 12
12
J
28 32Right-handed 310
Helix 13
13
J
62 65Right-handed 310
Helix 14
14
J
87 91Right-handed 310
Helix 15
15
N
81 85Right-handed 310
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There are 14 sheets in PDB entry 1OAZ. Click on sheet of interest to get list of strands forming it: AA, BA, HA, HB, HC, JA, JB, JC, LA, LB, LC, NA, NB, NC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
68 73parallel
Strand 3
A
22 28parallel
Strand 4
A
91 96anti-parallel
Strand 5
A
100 105anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
68 73parallel
Strand 3
B
22 28parallel
Strand 4
B
91 96anti-parallel
Strand 5
B
100 105anti-parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
72 73anti-parallel
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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118parallel
Strand 3
H
93 100anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118parallel
Strand 3
H
93 100anti-parallel
Strand 4
H
106 107anti-parallel
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There are 4 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
18 25anti-parallel
Strand 3
J
78 83anti-parallel
Strand 4
J
70 73anti-parallel
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There are 6 strands in JB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
114 118parallel
Strand 3
J
93 95anti-parallel
Strand 4
J
36 39anti-parallel
Strand 5
J
46 52anti-parallel
Strand 6
J
57 60anti-parallel
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There are 3 strands in JC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
33 34first strand
Strand 2
J
97 100anti-parallel
Strand 3
J
106 110anti-parallel
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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 5first strand
Strand 2
L
17 24anti-parallel
Strand 3
L
72 78anti-parallel
Strand 4
L
64 69anti-parallel
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There are 2 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
105 108parallel
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There are 5 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
55 56first strand
Strand 2
L
45 51anti-parallel
Strand 3
L
36 41anti-parallel
Strand 4
L
87 94anti-parallel
Strand 5
L
97 100anti-parallel
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There are 4 strands in NA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
4 5first strand
Strand 2
N
17 24anti-parallel
Strand 3
N
72 78anti-parallel
Strand 4
N
64 69anti-parallel
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There are 2 strands in NB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
9 12first strand
Strand 2
N
105 108parallel
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There are 5 strands in NC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
55 56first strand
Strand 2
N
45 51anti-parallel
Strand 3
N
36 41anti-parallel
Strand 4
N
87 94anti-parallel
Strand 5
N
97 100anti-parallel
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