Analysis of interatomic Contacts of Structural Units in PDB entry:
1OFG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OFG entry

There are 6 chains in PDB entry 1OFG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1TYR 381
B
 ALA 1TYR 381
C
 ALA 1TYR 381
D
 ALA 1TYR 381
E
 ALA 1TYR 381
F
 ALA 1TYR 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 1OFG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 8Right-handed alpha
Helix 2
2
A
41 45Right-handed alpha
Helix 3
3
A
47 51Right-handed alpha
Helix 4
4
A
67 77Right-handed alpha
Helix 5
5
A
81 83Right-handed 310
Helix 6
6
A
90 94Right-handed 310
Helix 7
7
A
108 120Right-handed 310
Helix 8
8
A
135 148Right-handed alpha
Helix 9
9
A
157 159Right-handed 310
Helix 10
10
A
162 172Right-handed alpha
Helix 11
11
A
195 198Right-handed alpha
Helix 12
12
A
203 206Right-handed alpha
Helix 13
13
A
210 213Right-handed alpha
Helix 14
14
A
215 226Right-handed alpha
Helix 15
15
A
244 246Right-handed 310
Helix 16
16
A
324 337Right-handed alpha
Helix 17
17
A
346 365Right-handed alpha
Helix 18
18
B
5 8Right-handed alpha
Helix 19
19
B
41 45Right-handed alpha
Helix 20
20
B
47 51Right-handed alpha
Helix 21
21
B
67 77Right-handed alpha
Helix 22
22
B
81 83Right-handed 310
Helix 23
23
B
90 94Right-handed 310
Helix 24
24
B
108 120Right-handed 310
Helix 25
25
B
135 148Right-handed alpha
Helix 26
26
B
157 159Right-handed 310
Helix 27
27
B
162 172Right-handed alpha
Helix 28
28
B
195 198Right-handed alpha
Helix 29
29
B
203 206Right-handed alpha
Helix 30
30
B
210 213Right-handed alpha
Helix 31
31
B
215 226Right-handed alpha
Helix 32
32
B
244 246Right-handed 310
Helix 33
33
B
324 337Right-handed alpha
Helix 34
34
B
346 365Right-handed alpha
Helix 35
35
C
5 8Right-handed alpha
Helix 36
36
C
41 45Right-handed alpha
Helix 37
37
C
47 51Right-handed alpha
Helix 38
38
C
67 77Right-handed alpha
Helix 39
39
C
81 83Right-handed 310
Helix 40
40
C
90 94Right-handed 310
Helix 41
41
C
108 120Right-handed 310
Helix 42
42
C
135 148Right-handed alpha
Helix 43
43
C
157 159Right-handed 310
Helix 44
44
C
162 172Right-handed alpha
Helix 45
45
C
195 198Right-handed alpha
Helix 46
46
C
203 206Right-handed alpha
Helix 47
47
C
210 213Right-handed alpha
Helix 48
48
C
215 226Right-handed alpha
Helix 49
49
C
244 246Right-handed 310
Helix 50
50
C
324 337Right-handed alpha
Helix 51
51
C
346 365Right-handed alpha
Helix 52
52
D
5 8Right-handed alpha
Helix 53
53
D
41 45Right-handed alpha
Helix 54
54
D
47 51Right-handed alpha
Helix 55
55
D
67 77Right-handed alpha
Helix 56
56
D
81 83Right-handed 310
Helix 57
57
D
90 94Right-handed 310
Helix 58
58
D
108 120Right-handed 310
Helix 59
59
D
135 148Right-handed alpha
Helix 60
60
D
157 159Right-handed 310
Helix 61
61
D
162 172Right-handed alpha
Helix 62
62
D
195 198Right-handed alpha
Helix 63
63
D
203 206Right-handed alpha
Helix 64
64
D
210 213Right-handed alpha
Helix 65
65
D
215 226Right-handed alpha
Helix 66
66
D
244 246Right-handed 310
Helix 67
67
D
324 337Right-handed alpha
Helix 68
68
D
346 365Right-handed alpha
Helix 69
69
E
5 8Right-handed alpha
Helix 70
70
E
41 45Right-handed alpha
Helix 71
71
E
47 51Right-handed alpha
Helix 72
72
E
67 77Right-handed alpha
Helix 73
73
E
81 83Right-handed 310
Helix 74
74
E
90 94Right-handed 310
Helix 75
75
E
108 120Right-handed 310
Helix 76
76
E
135 148Right-handed alpha
Helix 77
77
E
157 159Right-handed 310
Helix 78
78
E
162 172Right-handed alpha
Helix 79
79
E
195 198Right-handed alpha
Helix 80
80
E
203 206Right-handed alpha
Helix 81
81
E
210 213Right-handed alpha
Helix 82
82
E
215 226Right-handed alpha
Helix 83
83
E
244 246Right-handed 310
Helix 84
84
E
324 337Right-handed alpha
Helix 85
85
E
346 365Right-handed alpha
Helix 86
86
F
5 8Right-handed alpha
Helix 87
87
F
41 45Right-handed alpha
Helix 88
88
F
47 51Right-handed alpha
Helix 89
89
F
67 77Right-handed alpha
Helix 90
90
F
81 83Right-handed 310
Helix 91
91
F
90 94Right-handed 310
Helix 92
92
F
108 120Right-handed 310
Helix 93
93
F
135 148Right-handed alpha
Helix 94
94
F
157 159Right-handed 310
Helix 95
95
F
162 172Right-handed alpha
Helix 96
96
F
195 198Right-handed alpha
Helix 97
97
F
203 206Right-handed alpha
Helix 98
98
F
210 213Right-handed alpha
Helix 99
99
F
215 226Right-handed alpha
Helix 100
100
F
244 246Right-handed 310
Helix 101
101
F
324 337Right-handed alpha
Helix 102
102
F
346 365Right-handed alpha
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There are 10 sheets in PDB entry 1OFG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
124 127parallel
Strand 3
A
101 104parallel
Strand 4
A
32 37parallel
Strand 5
A
57 63parallel
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There are 16 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 238first strand
Strand 2
A
252 259anti-parallel
Strand 3
A
264 270anti-parallel
Strand 4
A
179 187parallel
Strand 5
A
276 283anti-parallel
Strand 6
A
287 290anti-parallel
Strand 7
A
301 305anti-parallel
Strand 8
A
308 312anti-parallel
Strand 9
C
308 312anti-parallel
Strand 10
C
301 305anti-parallel
Strand 11
C
287 290anti-parallel
Strand 12
C
276 283anti-parallel
Strand 13
C
179 187anti-parallel
Strand 14
C
264 270parallel
Strand 15
C
252 259anti-parallel
Strand 16
C
230 238anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
124 127parallel
Strand 3
B
101 104parallel
Strand 4
B
32 37parallel
Strand 5
B
57 63parallel
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There are 16 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 238first strand
Strand 2
B
252 259anti-parallel
Strand 3
B
264 270anti-parallel
Strand 4
B
179 187parallel
Strand 5
B
276 283anti-parallel
Strand 6
B
287 290anti-parallel
Strand 7
B
301 305anti-parallel
Strand 8
B
308 312anti-parallel
Strand 9
D
308 312anti-parallel
Strand 10
D
301 305anti-parallel
Strand 11
D
287 290anti-parallel
Strand 12
D
276 283anti-parallel
Strand 13
D
179 187anti-parallel
Strand 14
D
264 270parallel
Strand 15
D
252 259anti-parallel
Strand 16
D
230 238anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 154first strand
Strand 2
C
124 127parallel
Strand 3
C
101 104parallel
Strand 4
C
32 37parallel
Strand 5
C
57 63parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 154first strand
Strand 2
D
124 127parallel
Strand 3
D
101 104parallel
Strand 4
D
32 37parallel
Strand 5
D
57 63parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
152 154first strand
Strand 2
E
124 127parallel
Strand 3
E
101 104parallel
Strand 4
E
32 37parallel
Strand 5
E
57 63parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
230 238first strand
Strand 2
E
252 259anti-parallel
Strand 3
E
264 270anti-parallel
Strand 4
E
179 187parallel
Strand 5
E
276 283anti-parallel
Strand 6
E
287 290anti-parallel
Strand 7
E
301 305anti-parallel
Strand 8
E
308 312anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
152 154first strand
Strand 2
F
124 127parallel
Strand 3
F
101 104parallel
Strand 4
F
32 37parallel
Strand 5
F
57 63parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
230 238first strand
Strand 2
F
252 259anti-parallel
Strand 3
F
264 270anti-parallel
Strand 4
F
179 187parallel
Strand 5
F
276 283anti-parallel
Strand 6
F
287 290anti-parallel
Strand 7
F
301 305anti-parallel
Strand 8
F
308 312anti-parallel
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