Analysis of interatomic Contacts of Structural Units in PDB entry:
1OFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OFZ entry

There are 2 chains in PDB entry 1OFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1TRP 312
B
 PRO 1TRP 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1OFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 51Right-handed 310
Helix 2
2
A
101 106Right-handed 310
Helix 3
3
B
49 51Right-handed 310
Helix 4
4
B
101 106Right-handed 310
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There are 15 sheets in PDB entry 1OFZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG, BH,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
22 28anti-parallel
Strand 3
A
33 40anti-parallel
Strand 4
A
53 56anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
22 28anti-parallel
Strand 3
A
33 40anti-parallel
Strand 4
A
46 47anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 70first strand
Strand 2
A
73 81anti-parallel
Strand 3
A
87 93anti-parallel
Strand 4
A
97 99anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
129 134anti-parallel
Strand 3
A
142 149anti-parallel
Strand 4
A
153 162anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 174first strand
Strand 2
A
177 183anti-parallel
Strand 3
A
188 194anti-parallel
Strand 4
A
199 207anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 219first strand
Strand 2
A
224 230anti-parallel
Strand 3
A
236 241anti-parallel
Strand 4
A
249 251anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 271first strand
Strand 2
A
275 282anti-parallel
Strand 3
A
286 293anti-parallel
Strand 4
A
297 300anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 15first strand
Strand 2
B
22 28anti-parallel
Strand 3
B
33 40anti-parallel
Strand 4
B
53 56anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 15first strand
Strand 2
B
22 28anti-parallel
Strand 3
B
33 40anti-parallel
Strand 4
B
46 47anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 70first strand
Strand 2
B
73 81anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
97 99anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
129 134anti-parallel
Strand 3
B
142 149anti-parallel
Strand 4
B
153 162anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 174first strand
Strand 2
B
177 183anti-parallel
Strand 3
B
188 194anti-parallel
Strand 4
B
206 207anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 174first strand
Strand 2
B
177 183anti-parallel
Strand 3
B
188 194anti-parallel
Strand 4
B
199 201anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 219first strand
Strand 2
B
224 230anti-parallel
Strand 3
B
236 241anti-parallel
Strand 4
B
249 251anti-parallel
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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 271first strand
Strand 2
B
275 282anti-parallel
Strand 3
B
286 293anti-parallel
Strand 4
B
297 300anti-parallel
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