Analysis of interatomic Contacts of Structural Units in PDB entry:
1OHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1OHG entry

There are 7 chains in PDB entry 1OHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 104	GLY 384
B	SER 104	GLY 384
C	SER 104	GLY 384
D	SER 104	GLY 384
E	SER 104	GLY 384
F	SER 104	GLY 384
G	SER 104	GLY 384

There are 78 helices in PDB entry 1OHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	112	116	Right-handed 310
Helix 2	2	A	134	138	Right-handed 310
Helix 3	3	A	194	200	Right-handed alpha
Helix 4	4	A	202	225	Right-handed alpha
Helix 5	5	A	235	240	Right-handed alpha
Helix 6	6	A	244	248	Right-handed 310
Helix 7	7	A	253	265	Right-handed alpha
Helix 8	8	A	266	269	Right-handed 310
Helix 9	9	A	278	287	Right-handed alpha
Helix 10	10	A	328	332	Right-handed alpha
Helix 11	11	A	372	374	Right-handed 310
Helix 12	12	B	112	116	Right-handed 310
Helix 13	13	B	134	138	Right-handed 310
Helix 14	14	B	194	200	Right-handed alpha
Helix 15	15	B	202	226	Right-handed alpha
Helix 16	16	B	235	240	Right-handed alpha
Helix 17	17	B	244	248	Right-handed 310
Helix 18	18	B	253	267	Right-handed alpha
Helix 19	19	B	278	287	Right-handed alpha
Helix 20	20	B	328	332	Right-handed alpha
Helix 21	21	B	349	355	Right-handed 310
Helix 22	22	B	372	374	Right-handed 310
Helix 23	23	C	112	116	Right-handed 310
Helix 24	24	C	133	138	Right-handed alpha
Helix 25	25	C	194	200	Right-handed alpha
Helix 26	26	C	201	226	Right-handed alpha
Helix 27	27	C	235	240	Right-handed alpha
Helix 28	28	C	244	248	Right-handed 310
Helix 29	29	C	253	265	Right-handed alpha
Helix 30	30	C	266	269	Right-handed 310
Helix 31	31	C	278	287	Right-handed alpha
Helix 32	32	C	328	332	Right-handed alpha
Helix 33	33	C	372	374	Right-handed 310
Helix 34	34	D	112	116	Right-handed 310
Helix 35	35	D	133	138	Right-handed alpha
Helix 36	36	D	194	200	Right-handed alpha
Helix 37	37	D	201	226	Right-handed alpha
Helix 38	38	D	235	240	Right-handed alpha
Helix 39	39	D	244	248	Right-handed 310
Helix 40	40	D	253	265	Right-handed alpha
Helix 41	41	D	266	269	Right-handed 310
Helix 42	42	D	278	287	Right-handed alpha
Helix 43	43	D	329	331	Right-handed 310
Helix 44	44	D	372	374	Right-handed 310
Helix 45	45	E	112	116	Right-handed 310
Helix 46	46	E	133	138	Right-handed alpha
Helix 47	47	E	194	200	Right-handed alpha
Helix 48	48	E	202	226	Right-handed alpha
Helix 49	49	E	235	240	Right-handed alpha
Helix 50	50	E	244	248	Right-handed 310
Helix 51	51	E	253	267	Right-handed alpha
Helix 52	52	E	278	287	Right-handed alpha
Helix 53	53	E	329	331	Right-handed 310
Helix 54	54	E	352	355	Right-handed 310
Helix 55	55	E	372	374	Right-handed 310
Helix 56	56	F	133	138	Right-handed alpha
Helix 57	57	F	194	200	Right-handed alpha
Helix 58	58	F	202	226	Right-handed alpha
Helix 59	59	F	235	240	Right-handed alpha
Helix 60	60	F	244	248	Right-handed 310
Helix 61	61	F	253	265	Right-handed alpha
Helix 62	62	F	266	269	Right-handed 310
Helix 63	63	F	278	287	Right-handed alpha
Helix 64	64	F	329	331	Right-handed 310
Helix 65	65	F	350	355	Right-handed 310
Helix 66	66	F	372	374	Right-handed 310
Helix 67	67	G	112	116	Right-handed 310
Helix 68	68	G	133	138	Right-handed alpha
Helix 69	69	G	194	200	Right-handed alpha
Helix 70	70	G	200	226	Right-handed alpha
Helix 71	71	G	235	240	Right-handed alpha
Helix 72	72	G	244	248	Right-handed 310
Helix 73	73	G	253	266	Right-handed alpha
Helix 74	74	G	267	269	Right-handed 310
Helix 75	75	G	278	287	Right-handed alpha
Helix 76	76	G	328	332	Right-handed alpha
Helix 77	77	G	349	355	Right-handed 310
Helix 78	78	G	372	374	Right-handed 310

There are 23 sheets in PDB entry 1OHG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, CA, CB, A, DB, C, EA, EB, EC, FA, GA, GB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	125	first strand
Strand 2	B	147	157	parallel
Strand 3	B	173	182	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	142	first strand
Strand 2	A	333	337	parallel
Strand 3	A	368	370	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	182	first strand
Strand 2	A	147	157	anti-parallel
Strand 3	F	119	125	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	F	173	193	anti-parallel
Strand 3	F	147	157	anti-parallel
Strand 4	E	119	125	parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	F	173	193	anti-parallel
Strand 3	F	357	370	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	346	first strand
Strand 2	A	357	366	anti-parallel
Strand 3	A	184	193	anti-parallel
Strand 4	B	161	162	anti-parallel

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There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	376	380	parallel
Strand 3	A	323	327	anti-parallel
Strand 4	A	274	277	anti-parallel
Strand 5	A	311	315	parallel
Strand 6	A	307	308	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	125	first strand
Strand 2	C	147	157	parallel
Strand 3	C	173	193	anti-parallel
Strand 4	C	357	370	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	125	first strand
Strand 2	C	147	157	parallel
Strand 3	C	173	193	anti-parallel
Strand 4	D	161	162	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	142	first strand
Strand 2	B	333	337	parallel
Strand 3	B	368	370	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	346	first strand
Strand 2	B	357	366	anti-parallel
Strand 3	B	184	193	anti-parallel
Strand 4	C	161	162	anti-parallel

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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	376	380	parallel
Strand 3	B	323	327	anti-parallel
Strand 4	B	274	277	anti-parallel
Strand 5	B	311	315	parallel
Strand 6	B	307	308	anti-parallel

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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	125	first strand
Strand 2	D	147	157	parallel
Strand 3	D	173	182	anti-parallel

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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	376	380	parallel
Strand 3	C	323	327	anti-parallel
Strand 4	C	274	277	anti-parallel
Strand 5	C	311	315	parallel
Strand 6	C	307	308	anti-parallel

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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	125	first strand
Strand 2	E	147	157	parallel
Strand 3	E	173	182	anti-parallel

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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	142	first strand
Strand 2	D	333	346	parallel
Strand 3	D	357	370	anti-parallel
Strand 4	D	184	193	anti-parallel
Strand 5	E	161	162	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	242	first strand
Strand 2	D	376	380	parallel
Strand 3	D	323	327	anti-parallel
Strand 4	D	274	277	anti-parallel
Strand 5	D	311	315	parallel
Strand 6	D	307	308	anti-parallel

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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	139	142	first strand
Strand 2	E	333	337	parallel
Strand 3	E	368	370	anti-parallel

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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	346	first strand
Strand 2	E	357	366	anti-parallel
Strand 3	E	184	193	anti-parallel
Strand 4	F	161	162	anti-parallel

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There are 6 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	241	242	first strand
Strand 2	E	376	380	parallel
Strand 3	E	323	327	anti-parallel
Strand 4	E	274	277	anti-parallel
Strand 5	E	311	315	parallel
Strand 6	E	307	308	anti-parallel

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	241	242	first strand
Strand 2	F	376	380	parallel
Strand 3	F	323	327	anti-parallel
Strand 4	F	274	277	anti-parallel
Strand 5	F	311	315	parallel
Strand 6	F	307	308	anti-parallel

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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	139	142	first strand
Strand 2	G	333	346	parallel
Strand 3	G	357	370	anti-parallel
Strand 4	G	173	193	anti-parallel
Strand 5	G	147	157	anti-parallel

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There are 6 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	241	242	first strand
Strand 2	G	376	380	parallel
Strand 3	G	323	327	anti-parallel
Strand 4	G	274	277	anti-parallel
Strand 5	G	311	315	parallel
Strand 6	G	307	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1OHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
1OHG